Jatropha Genome Database

JcCB0189931.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0189931.10 + phase: 0 
         (327 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|262091321|gb|GT228748.1|GT228748 JC313 Jatropha seeds from fr...   117   8e-27

>gi|262091321|gb|GT228748.1|GT228748 JC313 Jatropha seeds from
           fruits at three stages of maturation Jatropha curcas
           cDNA clone PL06SE.E07.scf 5', mRNA sequence
          Length = 603

 Score =  117 bits (59), Expect = 8e-27
 Identities = 140/167 (83%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggggagagggagagtggagttgaagaggatagagaacaagataaacaggcaggtgaca 60
           ||||| ||||| ||||| ||  |||||||||||||||||||||| ||| |||| || || 
Sbjct: 346 atgggaagaggaagagttgaactgaagaggatagagaacaagatcaaccggcaagtcact 405

                                                                       
Query: 61  tttgcaaagaggagaaatgggttgttgaagaaagcctatgagctttcagtgctttgtgat 120
           ||  | || || ||||||||||||||||||||||| || |||||||| || || || |||
Sbjct: 406 ttctcgaaaagaagaaatgggttgttgaagaaagcttacgagctttctgttctctgcgat 465

                                                          
Query: 121 gctgaggttgcccttatcatcttttctaaccgtggcaagctctatga 167
           ||||| ||||||||||| ||||| ||||  ||||||||||| |||||
Sbjct: 466 gctgaagttgcccttattatcttctctagtcgtggcaagctttatga 512