Jatropha Genome Database

JcCB0189041.20
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0189041.20 - phase: 2 /partial
         (589 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|268522545|gb|FM896549.1|FM896549 FM896549 Jatropha curcas emb...   797   0.0  

>gi|268522545|gb|FM896549.1|FM896549 FM896549 Jatropha curcas embryo
           71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_003784,
           mRNA sequence
          Length = 615

 Score =  797 bits (402), Expect = 0.0
 Identities = 405/406 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   aatgctctcaaatagagagtcagctagacggtcaagaagaagaaagcaggcccatttgac 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 210 aatgctctcaaatagagagtcagctagacggtcaagaagaagaaagcaggcccatttgac 269

                                                                       
Query: 61  tgagcttgagacgcaggttgcccaattgagagttgaaaattcttctctgctgaaacgcct 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 tgagcttgagacgcaggttgcccaattgagagttgaaaattcttctctgctgaaacgcct 329

                                                                       
Query: 121 ctccgacatcagcaataagtacaatgatgcttctgtggataacagagttttaaaagctga 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 ctccgacatcagcaataagtacaatgatgcttctgtggataacagagttttaaaagctga 389

                                                                       
Query: 181 cgttgaaacattaagagctaaggtgaagatggctgaggagactgtcaaaaggataactgg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 cgttgaaacattaagagctaaggtgaagatggctgaggagactgtcaaaaggataactgg 449

                                                                       
Query: 241 gttgaatcctttgtcccattctatgcctgagatatccacaatcagcatgccatcatttga 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 450 gttgaatcctttgtcccattctatgcctgagatatccacaatcagcatgccatcatttga 509

                                                                       
Query: 301 tggaagcccttctgacactttgacagatgctgctgttcctattcaagatgaaccgaaacg 360
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 510 tggaagcccttcggacactttgacagatgctgctgttcctattcaagatgaaccgaaacg 569

                                                         
Query: 361 cttgtatcagcttccaaataatcccctatccactcgtgacccgaga 406
           ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 570 cttgtatcagcttccaaataatcccctatccactcgtgacccgaga 615