Jatropha Genome Database
- JcCB0186021.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0186021.10 + phase: 0
(249 letters)
Database: JAT_13201ests
13,201 sequences; 6,040,684 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|218687214|gb|GH295701.1|GH295701 JCL150 Jatropha curcas total... 494 e-140
gi|218687229|gb|GH296522.1|GH296522 JCL972 Jatropha curcas total... 494 e-140
gi|218687441|gb|GH296095.1|GH296095 JCL544 Jatropha curcas total... 494 e-140
gi|218687825|gb|GH296340.1|GH296340 JCL790 Jatropha curcas total... 494 e-140
gi|237681009|gb|GO247645.1|GO247645 JcrME_RL1189 Expressed seque... 494 e-140
gi|268518566|gb|FM888753.1|FM888753 FM888753 Jatropha curcas emb... 494 e-140
gi|268522205|gb|FM893045.1|FM893045 FM893045 Jatropha curcas emb... 494 e-140
gi|268518344|gb|FM888618.1|FM888618 FM888618 Jatropha curcas emb... 470 e-133
gi|268525503|gb|FM890758.1|FM890758 FM890758 Jatropha curcas emb... 464 e-131
gi|268522234|gb|FM893074.1|FM893074 FM893074 Jatropha curcas emb... 398 e-111
gi|268518319|gb|FM888593.1|FM888593 FM888593 Jatropha curcas emb... 369 e-102
gi|268520274|gb|FM890122.1|FM890122 FM890122 Jatropha curcas emb... 242 2e-64
gi|268519451|gb|FM887918.1|FM887918 FM887918 Jatropha curcas emb... 170 5e-43
>gi|218687214|gb|GH295701.1|GH295701 JCL150 Jatropha curcas total
leaf library Jatropha curcas cDNA, mRNA sequence
Length = 453
Score = 494 bits (249), Expect = e-140
Identities = 249/249 (100%)
Strand = Plus / Plus
Query: 1 atgcagaacgacgagggtcagaacatggatctttatatcccaaggaaatgctctgccaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25 atgcagaacgacgagggtcagaacatggatctttatatcccaaggaaatgctctgccaca 84
Query: 61 aacaggctaatcacttccaaagatcatgcttctgttcagatcaacattggtcacttagat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 85 aacaggctaatcacttccaaagatcatgcttctgttcagatcaacattggtcacttagat 144
Query: 121 gccaatggtaactacaccggtcaatttaccacttttgctctctgtggtttcgtccgagcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 145 gccaatggtaactacaccggtcaatttaccacttttgctctctgtggtttcgtccgagcc 204
Query: 181 cagggtgacgctgacagtgcccttgacaggctttggctgaagaagaaggttgaacttcgc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 cagggtgacgctgacagtgcccttgacaggctttggctgaagaagaaggttgaacttcgc 264
Query: 241 caacaatag 249
|||||||||
Sbjct: 265 caacaatag 273
>gi|218687229|gb|GH296522.1|GH296522 JCL972 Jatropha curcas total
leaf library Jatropha curcas cDNA, mRNA sequence
Length = 453
Score = 494 bits (249), Expect = e-140
Identities = 249/249 (100%)
Strand = Plus / Plus
Query: 1 atgcagaacgacgagggtcagaacatggatctttatatcccaaggaaatgctctgccaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25 atgcagaacgacgagggtcagaacatggatctttatatcccaaggaaatgctctgccaca 84
Query: 61 aacaggctaatcacttccaaagatcatgcttctgttcagatcaacattggtcacttagat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 85 aacaggctaatcacttccaaagatcatgcttctgttcagatcaacattggtcacttagat 144
Query: 121 gccaatggtaactacaccggtcaatttaccacttttgctctctgtggtttcgtccgagcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 145 gccaatggtaactacaccggtcaatttaccacttttgctctctgtggtttcgtccgagcc 204
Query: 181 cagggtgacgctgacagtgcccttgacaggctttggctgaagaagaaggttgaacttcgc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 cagggtgacgctgacagtgcccttgacaggctttggctgaagaagaaggttgaacttcgc 264
Query: 241 caacaatag 249
|||||||||
Sbjct: 265 caacaatag 273
>gi|218687441|gb|GH296095.1|GH296095 JCL544 Jatropha curcas total
leaf library Jatropha curcas cDNA, mRNA sequence
Length = 453
Score = 494 bits (249), Expect = e-140
Identities = 249/249 (100%)
Strand = Plus / Plus
Query: 1 atgcagaacgacgagggtcagaacatggatctttatatcccaaggaaatgctctgccaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25 atgcagaacgacgagggtcagaacatggatctttatatcccaaggaaatgctctgccaca 84
Query: 61 aacaggctaatcacttccaaagatcatgcttctgttcagatcaacattggtcacttagat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 85 aacaggctaatcacttccaaagatcatgcttctgttcagatcaacattggtcacttagat 144
Query: 121 gccaatggtaactacaccggtcaatttaccacttttgctctctgtggtttcgtccgagcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 145 gccaatggtaactacaccggtcaatttaccacttttgctctctgtggtttcgtccgagcc 204
Query: 181 cagggtgacgctgacagtgcccttgacaggctttggctgaagaagaaggttgaacttcgc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 cagggtgacgctgacagtgcccttgacaggctttggctgaagaagaaggttgaacttcgc 264
Query: 241 caacaatag 249
|||||||||
Sbjct: 265 caacaatag 273
>gi|218687825|gb|GH296340.1|GH296340 JCL790 Jatropha curcas total
leaf library Jatropha curcas cDNA, mRNA sequence
Length = 453
Score = 494 bits (249), Expect = e-140
Identities = 249/249 (100%)
Strand = Plus / Plus
Query: 1 atgcagaacgacgagggtcagaacatggatctttatatcccaaggaaatgctctgccaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25 atgcagaacgacgagggtcagaacatggatctttatatcccaaggaaatgctctgccaca 84
Query: 61 aacaggctaatcacttccaaagatcatgcttctgttcagatcaacattggtcacttagat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 85 aacaggctaatcacttccaaagatcatgcttctgttcagatcaacattggtcacttagat 144
Query: 121 gccaatggtaactacaccggtcaatttaccacttttgctctctgtggtttcgtccgagcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 145 gccaatggtaactacaccggtcaatttaccacttttgctctctgtggtttcgtccgagcc 204
Query: 181 cagggtgacgctgacagtgcccttgacaggctttggctgaagaagaaggttgaacttcgc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 cagggtgacgctgacagtgcccttgacaggctttggctgaagaagaaggttgaacttcgc 264
Query: 241 caacaatag 249
|||||||||
Sbjct: 265 caacaatag 273
>gi|237681009|gb|GO247645.1|GO247645 JcrME_RL1189 Expressed sequence
tags from Jatropha curcas root cDNA library Jatropha
curcas cDNA, mRNA sequence
Length = 650
Score = 494 bits (249), Expect = e-140
Identities = 249/249 (100%)
Strand = Plus / Plus
Query: 1 atgcagaacgacgagggtcagaacatggatctttatatcccaaggaaatgctctgccaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 155 atgcagaacgacgagggtcagaacatggatctttatatcccaaggaaatgctctgccaca 214
Query: 61 aacaggctaatcacttccaaagatcatgcttctgttcagatcaacattggtcacttagat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215 aacaggctaatcacttccaaagatcatgcttctgttcagatcaacattggtcacttagat 274
Query: 121 gccaatggtaactacaccggtcaatttaccacttttgctctctgtggtttcgtccgagcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 gccaatggtaactacaccggtcaatttaccacttttgctctctgtggtttcgtccgagcc 334
Query: 181 cagggtgacgctgacagtgcccttgacaggctttggctgaagaagaaggttgaacttcgc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 cagggtgacgctgacagtgcccttgacaggctttggctgaagaagaaggttgaacttcgc 394
Query: 241 caacaatag 249
|||||||||
Sbjct: 395 caacaatag 403
>gi|268518566|gb|FM888753.1|FM888753 FM888753 Jatropha curcas embryo
35-55 (DAF) Jatropha curcas cDNA clone rjcfea0_002222,
mRNA sequence
Length = 409
Score = 494 bits (249), Expect = e-140
Identities = 249/249 (100%)
Strand = Plus / Plus
Query: 1 atgcagaacgacgagggtcagaacatggatctttatatcccaaggaaatgctctgccaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 65 atgcagaacgacgagggtcagaacatggatctttatatcccaaggaaatgctctgccaca 124
Query: 61 aacaggctaatcacttccaaagatcatgcttctgttcagatcaacattggtcacttagat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 125 aacaggctaatcacttccaaagatcatgcttctgttcagatcaacattggtcacttagat 184
Query: 121 gccaatggtaactacaccggtcaatttaccacttttgctctctgtggtttcgtccgagcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 185 gccaatggtaactacaccggtcaatttaccacttttgctctctgtggtttcgtccgagcc 244
Query: 181 cagggtgacgctgacagtgcccttgacaggctttggctgaagaagaaggttgaacttcgc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 cagggtgacgctgacagtgcccttgacaggctttggctgaagaagaaggttgaacttcgc 304
Query: 241 caacaatag 249
|||||||||
Sbjct: 305 caacaatag 313
>gi|268522205|gb|FM893045.1|FM893045 FM893045 Jatropha curcas embryo
56-70 (DAF) Jatropha curcas cDNA clone rjcaeb0_003770,
mRNA sequence
Length = 527
Score = 494 bits (249), Expect = e-140
Identities = 249/249 (100%)
Strand = Plus / Plus
Query: 1 atgcagaacgacgagggtcagaacatggatctttatatcccaaggaaatgctctgccaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 76 atgcagaacgacgagggtcagaacatggatctttatatcccaaggaaatgctctgccaca 135
Query: 61 aacaggctaatcacttccaaagatcatgcttctgttcagatcaacattggtcacttagat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 136 aacaggctaatcacttccaaagatcatgcttctgttcagatcaacattggtcacttagat 195
Query: 121 gccaatggtaactacaccggtcaatttaccacttttgctctctgtggtttcgtccgagcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 196 gccaatggtaactacaccggtcaatttaccacttttgctctctgtggtttcgtccgagcc 255
Query: 181 cagggtgacgctgacagtgcccttgacaggctttggctgaagaagaaggttgaacttcgc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 cagggtgacgctgacagtgcccttgacaggctttggctgaagaagaaggttgaacttcgc 315
Query: 241 caacaatag 249
|||||||||
Sbjct: 316 caacaatag 324
>gi|268518344|gb|FM888618.1|FM888618 FM888618 Jatropha curcas embryo
35-55 (DAF) Jatropha curcas cDNA clone rjcfea0_002062,
mRNA sequence
Length = 509
Score = 470 bits (237), Expect = e-133
Identities = 244/245 (99%), Gaps = 1/245 (0%)
Strand = Plus / Plus
Query: 6 gaacgacgagggtcagaacatggatctttatatcccaagg-aaatgctctgccacaaaca 64
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 99 gaacgacgagggtcagaacatggatctttatatcccaagggaaatgctctgccacaaaca 158
Query: 65 ggctaatcacttccaaagatcatgcttctgttcagatcaacattggtcacttagatgcca 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 159 ggctaatcacttccaaagatcatgcttctgttcagatcaacattggtcacttagatgcca 218
Query: 125 atggtaactacaccggtcaatttaccacttttgctctctgtggtttcgtccgagcccagg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 219 atggtaactacaccggtcaatttaccacttttgctctctgtggtttcgtccgagcccagg 278
Query: 185 gtgacgctgacagtgcccttgacaggctttggctgaagaagaaggttgaacttcgccaac 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 gtgacgctgacagtgcccttgacaggctttggctgaagaagaaggttgaacttcgccaac 338
Query: 245 aatag 249
|||||
Sbjct: 339 aatag 343
>gi|268525503|gb|FM890758.1|FM890758 FM890758 Jatropha curcas embryo
56-70 (DAF) Jatropha curcas cDNA clone rjcaeb1_000682,
mRNA sequence
Length = 388
Score = 464 bits (234), Expect = e-131
Identities = 247/250 (98%), Gaps = 1/250 (0%)
Strand = Plus / Plus
Query: 1 atgcagaacgacgagggtcagaacatggatctttatatcccaaggaaatgctctgccaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 48 atgcagaacgacgagggtcagaacatggatctttatatcccaaggaaatgctctgccaca 107
Query: 61 aacaggctaatcacttccaaagatcatgcttctgttcagatcaacattggtcacttagat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 108 aacaggctaatcacttccaaagatcatgcttctgttcagatcaacattggtcacttagat 167
Query: 121 gccaatggtaactacaccggtcaattt-accacttttgctctctgtggtttcgtccgagc 179
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 168 gccaatggtaactacaccggtcaatttgaccacttttgctctctgtggtttcgtccgagc 227
Query: 180 ccagggtgacgctgacagtgcccttgacaggctttggctgaagaagaaggttgaacttcg 239
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 228 ccaggatgacgctgacagtgcccttgacaggctttggctgaagaagaaggttgaacttcg 287
Query: 240 ccaacaatag 249
||||| ||||
Sbjct: 288 ccaaccatag 297
>gi|268522234|gb|FM893074.1|FM893074 FM893074 Jatropha curcas embryo
56-70 (DAF) Jatropha curcas cDNA clone rjcaeb0_003835,
mRNA sequence
Length = 412
Score = 398 bits (201), Expect = e-111
Identities = 201/201 (100%)
Strand = Plus / Plus
Query: 49 tgctctgccacaaacaggctaatcacttccaaagatcatgcttctgttcagatcaacatt 108
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5 tgctctgccacaaacaggctaatcacttccaaagatcatgcttctgttcagatcaacatt 64
Query: 109 ggtcacttagatgccaatggtaactacaccggtcaatttaccacttttgctctctgtggt 168
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 65 ggtcacttagatgccaatggtaactacaccggtcaatttaccacttttgctctctgtggt 124
Query: 169 ttcgtccgagcccagggtgacgctgacagtgcccttgacaggctttggctgaagaagaag 228
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 125 ttcgtccgagcccagggtgacgctgacagtgcccttgacaggctttggctgaagaagaag 184
Query: 229 gttgaacttcgccaacaatag 249
|||||||||||||||||||||
Sbjct: 185 gttgaacttcgccaacaatag 205
>gi|268518319|gb|FM888593.1|FM888593 FM888593 Jatropha curcas embryo
35-55 (DAF) Jatropha curcas cDNA clone rjcfea0_002034,
mRNA sequence
Length = 403
Score = 369 bits (186), Expect = e-102
Identities = 193/194 (99%), Gaps = 1/194 (0%)
Strand = Plus / Plus
Query: 57 cacaaacaggctaatcacttccaaagatcatgcttctgttcagatcaacattggtcactt 116
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17 cacaaacaggctaatcacttccaaagatcatgcttctgttcagatcaacattggtcactt 76
Query: 117 agatgccaatggtaac-tacaccggtcaatttaccacttttgctctctgtggtttcgtcc 175
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77 agatgccaatggtaacntacaccggtcaatttaccacttttgctctctgtggtttcgtcc 136
Query: 176 gagcccagggtgacgctgacagtgcccttgacaggctttggctgaagaagaaggttgaac 235
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 137 gagcccagggtgacgctgacagtgcccttgacaggctttggctgaagaagaaggttgaac 196
Query: 236 ttcgccaacaatag 249
||||||||||||||
Sbjct: 197 ttcgccaacaatag 210
>gi|268520274|gb|FM890122.1|FM890122 FM890122 Jatropha curcas embryo
35-55 (DAF) Jatropha curcas cDNA clone rjcfea0_003923,
mRNA sequence
Length = 472
Score = 242 bits (122), Expect = 2e-64
Identities = 129/130 (99%), Gaps = 1/130 (0%)
Strand = Plus / Minus
Query: 121 gccaatggtaactacaccggtcaatttaccacttttgctctctgtggtttcgtccgagcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 296 gccaatggtaactacaccggtcaatttaccacttttgctctctgtggtttcgtccgagcc 237
Query: 181 cagggtgacgctgacagtgcccttgacaggctttggctgaagaagaaggttgaa-cttcg 239
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 236 cagggtgacgctgacagtgcccttgacaggctttggctgaagaagaaggttgaagcttcg 177
Query: 240 ccaacaatag 249
||||||||||
Sbjct: 176 ccaacaatag 167
>gi|268519451|gb|FM887918.1|FM887918 FM887918 Jatropha curcas embryo
35-55 (DAF) Jatropha curcas cDNA clone rjcfea0_001209,
mRNA sequence
Length = 154
Score = 170 bits (86), Expect = 5e-43
Identities = 86/86 (100%)
Strand = Plus / Plus
Query: 164 gtggtttcgtccgagcccagggtgacgctgacagtgcccttgacaggctttggctgaaga 223
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtggtttcgtccgagcccagggtgacgctgacagtgcccttgacaggctttggctgaaga 60
Query: 224 agaaggttgaacttcgccaacaatag 249
||||||||||||||||||||||||||
Sbjct: 61 agaaggttgaacttcgccaacaatag 86