Jatropha Genome Database

JcCB0184671.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0184671.10 + phase: 0 
         (159 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|268524322|gb|FM895002.1|FM895002 FM895002 Jatropha curcas emb...   287   2e-78

>gi|268524322|gb|FM895002.1|FM895002 FM895002 Jatropha curcas embryo
           71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_001330,
           mRNA sequence
          Length = 530

 Score =  287 bits (145), Expect = 2e-78
 Identities = 148/149 (99%)
 Strand = Plus / Minus

                                                                       
Query: 11  ggaggagcatctcaacagctatctctgctggagcagcactggcagtgacttctgcagtta 70
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 ggaggagcatctcaacagctatctctgctggagcagcactggcagtgacttctgcagtta 445

                                                                       
Query: 71  ttgatgctggaggtcagaccacgagaatagacaatggcaaggaatactacccttacacca 130
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 ttgatgctggatgtcagaccacgagaatagacaatggcaaggaatactacccttacacca 385

                                        
Query: 131 ccaagaaaagatccactgctgagagttaa 159
           |||||||||||||||||||||||||||||
Sbjct: 384 ccaagaaaagatccactgctgagagttaa 356