Jatropha Genome Database

JcCB0175681.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0175681.10 + phase: 1 /partial
         (596 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|262091193|gb|GT228620.1|GT228620 JC185 Jatropha seeds from fr...   924   0.0  

>gi|262091193|gb|GT228620.1|GT228620 JC185 Jatropha seeds from
           fruits at three stages of maturation Jatropha curcas
           cDNA clone PL02SE.H11.scf 5', mRNA sequence
          Length = 486

 Score =  924 bits (466), Expect = 0.0
 Identities = 481/486 (98%)
 Strand = Plus / Plus

                                                                       
Query: 61  aaatccaaaagaagctgaggaatgaattagacacagtacttggacctggtcaccaaatca 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   aaatccaaaagaagctgaggaatgaattagacacagtacttggacctggtcaccaaatca 60

                                                                       
Query: 121 ccgaacctgacacacacaaactcccctatcttcaggctgtcgtcaaagaaactctccgtc 180
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  ccgaacctgacactcacaaactcccctatcttcaggctgtcgtcaaagaaactctccgtc 120

                                                                       
Query: 181 tcaggatggccattcctcttcttgttcctcacatgaatctccacgaagctaagcttgccg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tcaggatggccattcctcttcttgttcctcacatgaatctccacgaagctaagcttgccg 180

                                                                       
Query: 241 gatatgacattcctgctgaaagcaaaattttagttaatgcttggtggcttgctaacaatc 300
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gatatgacattcccgctgaaagcaaaattttagttaatgcttggtggcttgctaacaatc 240

                                                                       
Query: 301 ctgctaattggaaaaatcctgaagagttcaggccagaaaggttcttggaagaggagtcaa 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ctgctaattggaaaaatcctgaagagttcaggccagaaaggttcttggaagaggagtcaa 300

                                                                       
Query: 361 aggttgaggctaatggaaacgatttcagataccttcctttcggggtcggaagaaggagct 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aggttgaggctaatggaaacgatttcagataccttcctttcggggtcggaagaaggagct 360

                                                                       
Query: 421 gccctggaattattcttgcattgccaattcttggaattaccttggggcgtttggtacaga 480
           |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 361 gccctggaattattcttgcattgccaattcttggaattgccttggggcgtttggtacaga 420

                                                                       
Query: 481 actttgagctattgccacctcctggacagtcaaagctcgatactacagagaaaggtggcc 540
           |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 421 actttgagctattgccacctcctggacagtcaaagctcgatactacagagaacggtggcc 480

                 
Query: 541 aattca 546
           | ||||
Sbjct: 481 acttca 486