Jatropha Genome Database
- JcCB0175201.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0175201.10 - phase: 0
(1287 letters)
Database: JAT_13201ests
13,201 sequences; 6,040,684 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|268521771|gb|FM894367.1|FM894367 FM894367 Jatropha curcas emb... 478 e-135
gi|268521804|gb|FM894400.1|FM894400 FM894400 Jatropha curcas emb... 355 8e-98
gi|268524634|gb|FM895332.1|FM895332 FM895332 Jatropha curcas emb... 133 5e-31
>gi|268521771|gb|FM894367.1|FM894367 FM894367 Jatropha curcas embryo
71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_004707,
mRNA sequence
Length = 673
Score = 478 bits (241), Expect = e-135
Identities = 260/264 (98%), Gaps = 2/264 (0%)
Strand = Plus / Minus
Query: 1025 tggaggagttgtttgaagagggttctgctatgcttgcagaaaggctgggtaaagattttc 1084
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 673 tggaggagttgtttgaagagggttctgctatgcttgcagaaaggctgggtaa-gattttc 615
Query: 1085 cttcgaacacaaacactgggctattcagatgtgctgtatgccaagtggatcaacccccta 1144
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 614 gttcgaacacaaacactgggctattcagatgtgctgtatgccaagtggatcaacccccta 555
Query: 1145 ctgatagcttatcag-taaactcagggtcttttttctcacctggatcaaagccatgggaa 1203
||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 554 ctgatagcttatcaggtaaactcagggtcttttttctcacctggatcaaagccatgngaa 495
Query: 1204 ggccccttcctctgccctaactgtcgaaaaaagaaagatgccatggaagggaaaagaccg 1263
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 ggccccttcctctgccctaactgtcgaaaaaagaaagatgccatggaagggaaaagaccg 435
Query: 1264 agcagaccaatagtgactgcatag 1287
||||||||||||||||||||||||
Sbjct: 434 agcagaccaatagtgactgcatag 411
>gi|268521804|gb|FM894400.1|FM894400 FM894400 Jatropha curcas embryo
71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_004744,
mRNA sequence
Length = 590
Score = 355 bits (179), Expect = 8e-98
Identities = 179/179 (100%)
Strand = Plus / Minus
Query: 1109 tcagatgtgctgtatgccaagtggatcaaccccctactgatagcttatcagtaaactcag 1168
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 590 tcagatgtgctgtatgccaagtggatcaaccccctactgatagcttatcagtaaactcag 531
Query: 1169 ggtcttttttctcacctggatcaaagccatgggaaggccccttcctctgccctaactgtc 1228
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 530 ggtcttttttctcacctggatcaaagccatgggaaggccccttcctctgccctaactgtc 471
Query: 1229 gaaaaaagaaagatgccatggaagggaaaagaccgagcagaccaatagtgactgcatag 1287
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 470 gaaaaaagaaagatgccatggaagggaaaagaccgagcagaccaatagtgactgcatag 412
>gi|268524634|gb|FM895332.1|FM895332 FM895332 Jatropha curcas embryo
71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_002140,
mRNA sequence
Length = 510
Score = 133 bits (67), Expect = 5e-31
Identities = 70/71 (98%)
Strand = Plus / Minus
Query: 1217 gccctaactgtcgaaaaaagaaagatgccatggaagggaaaagaccgagcagaccaatag 1276
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 510 gccctaactgtcgaaaacagaaagatgccatggaagggaaaagaccgagcagaccaatag 451
Query: 1277 tgactgcatag 1287
|||||||||||
Sbjct: 450 tgactgcatag 440