Jatropha Genome Database

JcCB0171531.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0171531.10 - phase: 0 /partial
         (393 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|268524394|gb|FM895074.1|FM895074 FM895074 Jatropha curcas emb...   682   0.0  

>gi|268524394|gb|FM895074.1|FM895074 FM895074 Jatropha curcas embryo
           71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_001638,
           mRNA sequence
          Length = 402

 Score =  682 bits (344), Expect = 0.0
 Identities = 344/344 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggtcatcaacaaaatccttcgatccactctcaaaaaccagcttggttcacacagcaaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 47  atggtcatcaacaaaatccttcgatccactctcaaaaaccagcttggttcacacagcaaa 106

                                                                       
Query: 61  catgttgcagcttctggcagttcacagaagcatcttgcttcggctccatgcctggccaaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 107 catgttgcagcttctggcagttcacagaagcatcttgcttcggctccatgcctggccaaa 166

                                                                       
Query: 121 ttgtatggcacagaggcatctttgcaaaaggatgactcaacgactgattcgagggatggt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 167 ttgtatggcacagaggcatctttgcaaaaggatgactcaacgactgattcgagggatggt 226

                                                                       
Query: 181 agaggttataaggggcatgatatgttggcacctttcactgctgggtggcagagtactgat 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 227 agaggttataaggggcatgatatgttggcacctttcactgctgggtggcagagtactgat 286

                                                                       
Query: 241 ttgcatcctctcgtcatagataagtctgagggtagctatgtttatgacattaatgggaag 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 287 ttgcatcctctcgtcatagataagtctgagggtagctatgtttatgacattaatgggaag 346

                                                       
Query: 301 aagtatcttgattctcttgctggtctttggtgcactgctttggg 344
           ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 347 aagtatcttgattctcttgctggtctttggtgcactgctttggg 390