Jatropha Genome Database

JcCB0166761.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0166761.10 + phase: 0 
         (1440 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|237680502|gb|GO246714.1|GO246714 JcrME_RL0258 Expressed seque...    56   1e-07
gi|237679862|gb|GO247167.1|GO247167 JcrME_RL0711 Expressed seque...    50   7e-06

>gi|237680502|gb|GO246714.1|GO246714 JcrME_RL0258 Expressed sequence
            tags from Jatropha curcas root cDNA library Jatropha
            curcas cDNA, mRNA sequence
          Length = 700

 Score = 56.0 bits (28), Expect = 1e-07
 Identities = 49/56 (87%)
 Strand = Plus / Plus

                                                                    
Query: 959  ttgatgaattgaagtacctgaaattagttattaaagaaactttgagattacatcct 1014
            |||| ||||| || ||||||||| ||||| | || |||||||||||||||||||||
Sbjct: 83   ttgaggaattaaaatacctgaaactagttgtgaaggaaactttgagattacatcct 138


>gi|237679862|gb|GO247167.1|GO247167 JcrME_RL0711 Expressed sequence
            tags from Jatropha curcas root cDNA library Jatropha
            curcas cDNA, mRNA sequence
          Length = 619

 Score = 50.1 bits (25), Expect = 7e-06
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                         
Query: 986  ttattaaagaaactttgagattacatcct 1014
            ||||||||||||| |||||||||||||||
Sbjct: 525  ttattaaagaaacattgagattacatcct 553