Jatropha Genome Database
- JcCB0161621.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0161621.10 - phase: 0 /partial
(546 letters)
Database: JAT_13201ests
13,201 sequences; 6,040,684 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|268516974|gb|FM892526.1|FM892526 FM892526 Jatropha curcas emb... 646 0.0
gi|268523729|gb|FM892262.1|FM892262 FM892262 Jatropha curcas emb... 601 e-172
gi|268525534|gb|FM890789.1|FM890789 FM890789 Jatropha curcas emb... 541 e-154
gi|268525702|gb|FM890957.1|FM890957 FM890957 Jatropha curcas emb... 240 1e-63
>gi|268516974|gb|FM892526.1|FM892526 FM892526 Jatropha curcas embryo
56-70 (DAF) Jatropha curcas cDNA clone rjcaeb0_003095,
mRNA sequence
Length = 595
Score = 646 bits (326), Expect = 0.0
Identities = 326/326 (100%)
Strand = Plus / Plus
Query: 118 gactatgtgcctactgtgtttgacaacttcagtgcgaatgtggttgtggatgggagcaca 177
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 gactatgtgcctactgtgtttgacaacttcagtgcgaatgtggttgtggatgggagcaca 304
Query: 178 gtcaatctagggttgtgggatactgctggccaggaagattataatagattaagacctttg 237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 gtcaatctagggttgtgggatactgctggccaggaagattataatagattaagacctttg 364
Query: 238 agctatcgtggggctgatgttttcttgcttgctttctctctcattagcaaggccagttat 297
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 agctatcgtggggctgatgttttcttgcttgctttctctctcattagcaaggccagttat 424
Query: 298 gaaaatgttgcaaagaagtggattcctgaattgaggcattatgcacctggagtaccaatt 357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 gaaaatgttgcaaagaagtggattcctgaattgaggcattatgcacctggagtaccaatt 484
Query: 358 atccttgttgggactaagcttgatctccgagatgataagcaattcttcatagatcaccct 417
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 atccttgttgggactaagcttgatctccgagatgataagcaattcttcatagatcaccct 544
Query: 418 ggtgcagtgcccatcaccacagctca 443
||||||||||||||||||||||||||
Sbjct: 545 ggtgcagtgcccatcaccacagctca 570
>gi|268523729|gb|FM892262.1|FM892262 FM892262 Jatropha curcas embryo
56-70 (DAF) Jatropha curcas cDNA clone rjcaeb1_002766,
mRNA sequence
Length = 569
Score = 601 bits (303), Expect = e-172
Identities = 303/303 (100%)
Strand = Plus / Plus
Query: 118 gactatgtgcctactgtgtttgacaacttcagtgcgaatgtggttgtggatgggagcaca 177
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 gactatgtgcctactgtgtttgacaacttcagtgcgaatgtggttgtggatgggagcaca 326
Query: 178 gtcaatctagggttgtgggatactgctggccaggaagattataatagattaagacctttg 237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 gtcaatctagggttgtgggatactgctggccaggaagattataatagattaagacctttg 386
Query: 238 agctatcgtggggctgatgttttcttgcttgctttctctctcattagcaaggccagttat 297
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 agctatcgtggggctgatgttttcttgcttgctttctctctcattagcaaggccagttat 446
Query: 298 gaaaatgttgcaaagaagtggattcctgaattgaggcattatgcacctggagtaccaatt 357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 gaaaatgttgcaaagaagtggattcctgaattgaggcattatgcacctggagtaccaatt 506
Query: 358 atccttgttgggactaagcttgatctccgagatgataagcaattcttcatagatcaccct 417
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 atccttgttgggactaagcttgatctccgagatgataagcaattcttcatagatcaccct 566
Query: 418 ggt 420
|||
Sbjct: 567 ggt 569
>gi|268525534|gb|FM890789.1|FM890789 FM890789 Jatropha curcas embryo
56-70 (DAF) Jatropha curcas cDNA clone rjcaeb0_000728,
mRNA sequence
Length = 546
Score = 541 bits (273), Expect = e-154
Identities = 273/273 (100%)
Strand = Plus / Plus
Query: 118 gactatgtgcctactgtgtttgacaacttcagtgcgaatgtggttgtggatgggagcaca 177
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 gactatgtgcctactgtgtttgacaacttcagtgcgaatgtggttgtggatgggagcaca 333
Query: 178 gtcaatctagggttgtgggatactgctggccaggaagattataatagattaagacctttg 237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 gtcaatctagggttgtgggatactgctggccaggaagattataatagattaagacctttg 393
Query: 238 agctatcgtggggctgatgttttcttgcttgctttctctctcattagcaaggccagttat 297
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 agctatcgtggggctgatgttttcttgcttgctttctctctcattagcaaggccagttat 453
Query: 298 gaaaatgttgcaaagaagtggattcctgaattgaggcattatgcacctggagtaccaatt 357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 gaaaatgttgcaaagaagtggattcctgaattgaggcattatgcacctggagtaccaatt 513
Query: 358 atccttgttgggactaagcttgatctccgagat 390
|||||||||||||||||||||||||||||||||
Sbjct: 514 atccttgttgggactaagcttgatctccgagat 546
>gi|268525702|gb|FM890957.1|FM890957 FM890957 Jatropha curcas embryo
56-70 (DAF) Jatropha curcas cDNA clone rjcaeb0_000928,
mRNA sequence
Length = 483
Score = 240 bits (121), Expect = 1e-63
Identities = 121/121 (100%)
Strand = Plus / Plus
Query: 325 gaattgaggcattatgcacctggagtaccaattatccttgttgggactaagcttgatctc 384
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5 gaattgaggcattatgcacctggagtaccaattatccttgttgggactaagcttgatctc 64
Query: 385 cgagatgataagcaattcttcatagatcaccctggtgcagtgcccatcaccacagctcag 444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 65 cgagatgataagcaattcttcatagatcaccctggtgcagtgcccatcaccacagctcag 124
Query: 445 g 445
|
Sbjct: 125 g 125