Jatropha Genome Database
- JcCB0152181.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0152181.10 - phase: 1 /pseudo/partial
(908 letters)
Database: JAT_13201ests
13,201 sequences; 6,040,684 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|268521505|gb|FM894257.1|FM894257 FM894257 Jatropha curcas emb... 285 4e-77
gi|268516564|gb|FM887043.1|FM887043 FM887043 Jatropha curcas emb... 62 1e-09
gi|268519659|gb|FM888126.1|FM888126 FM888126 Jatropha curcas emb... 62 1e-09
gi|268520347|gb|FM890195.1|FM890195 FM890195 Jatropha curcas emb... 62 1e-09
>gi|268521505|gb|FM894257.1|FM894257 FM894257 Jatropha curcas embryo
71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_004564,
mRNA sequence
Length = 148
Score = 285 bits (144), Expect = 4e-77
Identities = 144/144 (100%)
Strand = Plus / Plus
Query: 749 ttcggttgcaggttgctctatgatatcagataagagcttacctgccattgtaaaaatggg 808
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5 ttcggttgcaggttgctctatgatatcagataagagcttacctgccattgtaaaaatggg 64
Query: 809 tcatactcttttagggttgaatattcagcactgcaatgccattagcagcagcactgttga 868
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 65 tcatactcttttagggttgaatattcagcactgcaatgccattagcagcagcactgttga 124
Query: 869 ccttctcgtggagcgtttgtggag 892
||||||||||||||||||||||||
Sbjct: 125 ccttctcgtggagcgtttgtggag 148
>gi|268516564|gb|FM887043.1|FM887043 FM887043 Jatropha curcas embryo
35-55 (DAF) Jatropha curcas cDNA clone rjcfea0_000111,
mRNA sequence
Length = 615
Score = 61.9 bits (31), Expect = 1e-09
Identities = 70/83 (84%)
Strand = Plus / Plus
Query: 822 gggttgaatattcagcactgcaatgccattagcagcagcactgttgaccttctcgtggag 881
||||||||| |||| ||||||| |||||| ||||| ||||| |||||||| || || |||
Sbjct: 106 gggttgaatcttcaacactgcagtgccatcagcagtagcacagttgacctgcttgttgag 165
Query: 882 cgtttgtggaggtgtgatatcct 904
|||||||| |||||||||||
Sbjct: 166 aacttgtggagatgtgatatcct 188
>gi|268519659|gb|FM888126.1|FM888126 FM888126 Jatropha curcas embryo
35-55 (DAF) Jatropha curcas cDNA clone rjcfea0_001461,
mRNA sequence
Length = 535
Score = 61.9 bits (31), Expect = 1e-09
Identities = 70/83 (84%)
Strand = Plus / Plus
Query: 822 gggttgaatattcagcactgcaatgccattagcagcagcactgttgaccttctcgtggag 881
||||||||| |||| ||||||| |||||| ||||| ||||| |||||||| || || |||
Sbjct: 209 gggttgaatcttcaacactgcagtgccatcagcagtagcacagttgacctgcttgttgag 268
Query: 882 cgtttgtggaggtgtgatatcct 904
|||||||| |||||||||||
Sbjct: 269 aacttgtggagatgtgatatcct 291
>gi|268520347|gb|FM890195.1|FM890195 FM890195 Jatropha curcas embryo
35-55 (DAF) Jatropha curcas cDNA clone rjcfea0_004005,
mRNA sequence
Length = 580
Score = 61.9 bits (31), Expect = 1e-09
Identities = 70/83 (84%)
Strand = Plus / Plus
Query: 822 gggttgaatattcagcactgcaatgccattagcagcagcactgttgaccttctcgtggag 881
||||||||| |||| ||||||| |||||| ||||| ||||| |||||||| || || |||
Sbjct: 293 gggttgaatcttcaacactgcagtgccatcagcagtagcacagttgacctgcttgttgag 352
Query: 882 cgtttgtggaggtgtgatatcct 904
|||||||| |||||||||||
Sbjct: 353 aacttgtggagatgtgatatcct 375