Jatropha Genome Database
- JcCB0148531.20
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0148531.20 + phase: 0
(1053 letters)
Database: JAT_13201ests
13,201 sequences; 6,040,684 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|268526172|gb|FM891428.1|FM891428 FM891428 Jatropha curcas emb... 888 0.0
gi|268518802|gb|FM889045.1|FM889045 FM889045 Jatropha curcas emb... 785 0.0
gi|268519218|gb|FM887685.1|FM887685 FM887685 Jatropha curcas emb... 753 0.0
>gi|268526172|gb|FM891428.1|FM891428 FM891428 Jatropha curcas embryo
56-70 (DAF) Jatropha curcas cDNA clone rjcaeb0_001714,
mRNA sequence
Length = 462
Score = 888 bits (448), Expect = 0.0
Identities = 448/448 (100%)
Strand = Plus / Plus
Query: 178 ttcgcctctccagttgaatctctgttcttctcttctcttcaaaacagtccctttgtagcc 237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15 ttcgcctctccagttgaatctctgttcttctcttctcttcaaaacagtccctttgtagcc 74
Query: 238 caaaacccagaagaagctcatctcttcttcgtgcccttcgcttctggtatctccacgcgc 297
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 75 caaaacccagaagaagctcatctcttcttcgtgcccttcgcttctggtatctccacgcgc 134
Query: 298 tcgattgctcatgtaattagagatcttcggatggatttcccctattggaatcgtactctc 357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 135 tcgattgctcatgtaattagagatcttcggatggatttcccctattggaatcgtactctc 194
Query: 358 ggtgccgatcatttctatgtttcatgttctggtctcggctacgaatcggaccgaaatctt 417
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 195 ggtgccgatcatttctatgtttcatgttctggtctcggctacgaatcggaccgaaatctt 254
Query: 418 gtggagttgaagaaaaactcggttcagatttcctgctttccggcaccggaaggtaagttt 477
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 gtggagttgaagaaaaactcggttcagatttcctgctttccggcaccggaaggtaagttt 314
Query: 478 gttccccacaaggacataacattgcctccgccggtatattctctttctgcgcacccgccc 537
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 gttccccacaaggacataacattgcctccgccggtatattctctttctgcgcacccgccc 374
Query: 538 agaaacaaaactgcgagatatcgaggttttgtgaaacacaatggggtcaaagagtcagct 597
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 agaaacaaaactgcgagatatcgaggttttgtgaaacacaatggggtcaaagagtcagct 434
Query: 598 ttaatcaacgacttgaggaatgcttcag 625
||||||||||||||||||||||||||||
Sbjct: 435 ttaatcaacgacttgaggaatgcttcag 462
>gi|268518802|gb|FM889045.1|FM889045 FM889045 Jatropha curcas embryo
35-55 (DAF) Jatropha curcas cDNA clone rjcfea0_002602,
mRNA sequence
Length = 545
Score = 785 bits (396), Expect = 0.0
Identities = 399/400 (99%)
Strand = Plus / Plus
Query: 62 aatccgccattggttctgtttcagtgtacctctcacccaacatactattccccaattatc 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 146 aatccgccattggttctgtttcagtgtacctctcacccaacatactattccccaattatc 205
Query: 122 aaaatatgctgaaatctttcagaatttacatttatacccccgcaagacccttgtctttcg 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 aaaatatgctgaaatctttcagaatttacatttatacccccgcaagacccttgtctttcg 265
Query: 182 cctctccagttgaatctctgttcttctcttctcttcaaaacagtccctttgtagcccaaa 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 cctctccagttgaatctctgttcttctcttctcttcaaaacagtccctttgtagcccaaa 325
Query: 242 acccagaagaagctcatctcttcttcgtgcccttcgcttctggtatctccacgcgctcga 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 acccagaagaagctcatctcttcttcgtgcccttcgcttctggtatctccacgcgctcga 385
Query: 302 ttgctcatgtaattagagatcttcggatggatttcccctattggaatcgtactctcggtg 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 ttgctcatgtaattagagatcttcggatggatttcccctattggaatcgtactctcggtg 445
Query: 362 ccgatcatttctatgtttcatgttctggtctcggctacgaatcggaccgaaatcttgtgg 421
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 446 ccgatcatttctatgtttcatgttctggtctcggctaccaatcggaccgaaatcttgtgg 505
Query: 422 agttgaagaaaaactcggttcagatttcctgctttccggc 461
||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 agttgaagaaaaactcggttcagatttcctgctttccggc 545
>gi|268519218|gb|FM887685.1|FM887685 FM887685 Jatropha curcas embryo
35-55 (DAF) Jatropha curcas cDNA clone rjcfea0_000932,
mRNA sequence
Length = 435
Score = 753 bits (380), Expect = 0.0
Identities = 383/384 (99%)
Strand = Plus / Minus
Query: 670 gacagacttgcgagtagcgagttttgtttgtttgaatatggagccgatatttcggggata 729
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 435 gacagacttgcgagtagcgagttttgtttgttcgaatatggagccgatatttcggggata 376
Query: 730 ggaaaagctttgcatttcgggtgcataccggtggtaattactgatcatccgatgcaggac 789
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 ggaaaagctttgcatttcgggtgcataccggtggtaattactgatcatccgatgcaggac 316
Query: 790 ttgccgttgatggacgtgttgaggtggcaagagattgctgtttttgtggggtccaatagt 849
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 ttgccgttgatggacgtgttgaggtggcaagagattgctgtttttgtggggtccaatagt 256
Query: 850 ctgaatatcagtggtctgaaacgtgttatggatcgcacgtgcgaaggtgatacatccgag 909
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 ctgaatatcagtggtctgaaacgtgttatggatcgcacgtgcgaaggtgatacatccgag 196
Query: 910 ggaatgaggaaattgggtgcggcagcgagtatgcatttagtatggaatgaaatgcctgag 969
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 195 ggaatgaggaaattgggtgcggcagcgagtatgcatttagtatggaatgaaatgcctgag 136
Query: 970 ccgtacgattcgtttcatatggtgatgtatcagctttggcttagacggcacgcaattaga 1029
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 135 ccgtacgattcgtttcatatggtgatgtatcagctttggcttagacggcacgcaattaga 76
Query: 1030 tacgcacgaagagaatggctgtag 1053
||||||||||||||||||||||||
Sbjct: 75 tacgcacgaagagaatggctgtag 52