Jatropha Genome Database
- JcCB0143831.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0143831.10 + phase: 0 /pseudo/partial
(2271 letters)
Database: JAT_13201ests
13,201 sequences; 6,040,684 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|268521135|gb|FM891854.1|FM891854 FM891854 Jatropha curcas emb... 601 e-171
gi|268518916|gb|FM887383.1|FM887383 FM887383 Jatropha curcas emb... 422 e-118
gi|268518606|gb|FM888849.1|FM888849 FM888849 Jatropha curcas emb... 252 2e-66
>gi|268521135|gb|FM891854.1|FM891854 FM891854 Jatropha curcas embryo
56-70 (DAF) Jatropha curcas cDNA clone rjcaeb0_002252,
mRNA sequence
Length = 432
Score = 601 bits (303), Expect = e-171
Identities = 324/331 (97%)
Strand = Plus / Minus
Query: 1940 ctgatgttggcatggcaattggtgctggcactgatgtagccatagaagcagctgatatag 1999
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 ctgatgttggcatggccattggtgctggcactgatgtagccatagaagcagctgatatag 373
Query: 2000 ttctaatcaaaagcaacttagaagatgtagttacagccatagatctatctagaaagacca 2059
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 ttctaatcaaaagcaacttagaagatgtagttacagccatagatctatctagaaagaccc 313
Query: 2060 ttttccgtattcggctaaactatgtgtgggcacttggttataacattcttggtatgccta 2119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 ttttccgtattcggctaaactatgtgtgggcacttggttataacattcttggtatgccta 253
Query: 2120 ttgctgctggaattctttacccatttactggaattcggttgcccccttggcttgccggtg 2179
|||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||
Sbjct: 252 ttgctgctggaattctttacccatctactggaattcggttgcccccatggcttgccggtg 193
Query: 2180 cttgcatggctgcttcatcgctcagtgttgtttgttcttcactcttattgcagtcttata 2239
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 192 attgcatggctgcttcatcgctcagtgttgtttgttcttcactcttattccagtcttata 133
Query: 2240 agaaacctttgcgtgttagtagttctcgagg 2270
|||||||||||||||||||||||| ||||||
Sbjct: 132 agaaacctttgcgtgttagtagttttcgagg 102
>gi|268518916|gb|FM887383.1|FM887383 FM887383 Jatropha curcas embryo
35-55 (DAF) Jatropha curcas cDNA clone rjcfea0_000572,
mRNA sequence
Length = 213
Score = 422 bits (213), Expect = e-118
Identities = 213/213 (100%)
Strand = Plus / Plus
Query: 2051 gaaagaccattttccgtattcggctaaactatgtgtgggcacttggttataacattcttg 2110
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gaaagaccattttccgtattcggctaaactatgtgtgggcacttggttataacattcttg 60
Query: 2111 gtatgcctattgctgctggaattctttacccatttactggaattcggttgcccccttggc 2170
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gtatgcctattgctgctggaattctttacccatttactggaattcggttgcccccttggc 120
Query: 2171 ttgccggtgcttgcatggctgcttcatcgctcagtgttgtttgttcttcactcttattgc 2230
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ttgccggtgcttgcatggctgcttcatcgctcagtgttgtttgttcttcactcttattgc 180
Query: 2231 agtcttataagaaacctttgcgtgttagtagtt 2263
|||||||||||||||||||||||||||||||||
Sbjct: 181 agtcttataagaaacctttgcgtgttagtagtt 213
>gi|268518606|gb|FM888849.1|FM888849 FM888849 Jatropha curcas embryo
35-55 (DAF) Jatropha curcas cDNA clone rjcfea0_002350,
mRNA sequence
Length = 409
Score = 252 bits (127), Expect = 2e-66
Identities = 127/127 (100%)
Strand = Plus / Plus
Query: 1265 aggtgaatgcggttgtctttgataagacagggactttaacaattggaaaaccagtagtag 1324
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 235 aggtgaatgcggttgtctttgataagacagggactttaacaattggaaaaccagtagtag 294
Query: 1325 ttagtgctgtggtcttttccagtttctcaatggaggaattctgtgacatggctacttctg 1384
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 ttagtgctgtggtcttttccagtttctcaatggaggaattctgtgacatggctacttctg 354
Query: 1385 ctgaggt 1391
|||||||
Sbjct: 355 ctgaggt 361