Jatropha Genome Database

JcCB0143511.20
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0143511.20 + phase: 0 
         (1458 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|237680795|gb|GO247007.1|GO247007 JcrME_RL0551 Expressed seque...    70   8e-12

>gi|237680795|gb|GO247007.1|GO247007 JcrME_RL0551 Expressed sequence
           tags from Jatropha curcas root cDNA library Jatropha
           curcas cDNA, mRNA sequence
          Length = 700

 Score = 69.9 bits (35), Expect = 8e-12
 Identities = 89/107 (83%)
 Strand = Plus / Plus

                                                                       
Query: 25  aagccacatgtagtatgcttcccttacccagctcaaggtcacataaacccaatgcttaaa 84
           ||||| |||| ||| ||| |||| || ||||||||||| || |||||||| ||||| |||
Sbjct: 86  aagcctcatgcagtttgcatcccatatccagctcaaggccatataaaccctatgctaaaa 145

                                                          
Query: 85  ctagccaaactactccataccaaaggtttctacattacgtttgtcca 131
           ||||||||||| ||||||  |||||| ||| | ||||| || |||||
Sbjct: 146 ctagccaaacttctccatcacaaaggcttccatattaccttcgtcca 192