Jatropha Genome Database

JcCB0137811.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0137811.10 - phase: 0 /partial
         (1464 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|268518859|gb|FM889102.1|FM889102 FM889102 Jatropha curcas emb...   252   1e-66
gi|268520606|gb|FM889364.1|FM889364 FM889364 Jatropha curcas emb...   141   3e-33

>gi|268518859|gb|FM889102.1|FM889102 FM889102 Jatropha curcas embryo
            35-55 (DAF) Jatropha curcas cDNA clone rjcfea0_002675,
            mRNA sequence
          Length = 484

 Score =  252 bits (127), Expect = 1e-66
 Identities = 139/143 (97%)
 Strand = Plus / Plus

                                                                        
Query: 958  agctgggatattagcatgaaagatcaactttcagattacatgaaggtgtattttgaagca 1017
            |||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||
Sbjct: 190  agctgggatattagcatgaaagatcaacttccagattacatgaaggtgtattttcaagca 249

                                                                        
Query: 1018 ttattagatttttattctgaaataaaggaagaaacaaccaaggaaggaaggtctttctgt 1077
            |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 250  ttattagatttttattctgaaatagaggaagaaacaaccaaggaaggaaggtctttctgt 309

                                   
Query: 1078 attcattatgcgaaagaagcggt 1100
             ||||||||||||||||||||||
Sbjct: 310  gttcattatgcgaaagaagcggt 332



 Score =  168 bits (85), Expect = 1e-41
 Identities = 88/89 (98%)
 Strand = Plus / Plus

                                                                       
Query: 871 gccgttgctatgctgtctgtaatggatgatatttatgatgtgcatggcacaattgaagaa 930
           ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 1   gccgttgctatgctgtctgtaatggatgatatttatgatgtgcatggcacatttgaagaa 60

                                        
Query: 931 cttgagcttttcaccaaagtgattgaaag 959
           |||||||||||||||||||||||||||||
Sbjct: 61  cttgagcttttcaccaaagtgattgaaag 89


>gi|268520606|gb|FM889364.1|FM889364 FM889364 Jatropha curcas embryo
            35-55 (DAF) Jatropha curcas cDNA clone rjcfea0_003012,
            mRNA sequence
          Length = 494

 Score =  141 bits (71), Expect = 3e-33
 Identities = 71/71 (100%)
 Strand = Plus / Minus

                                                                        
Query: 1346 agtttgagcaagaaaggggacatgttgcttctgcagtagaatgttgtatgaagcaatatg 1405
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71   agtttgagcaagaaaggggacatgttgcttctgcagtagaatgttgtatgaagcaatatg 12

                       
Query: 1406 gtgtgtcaaag 1416
            |||||||||||
Sbjct: 11   gtgtgtcaaag 1