Jatropha Genome Database

JcCB0136381.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0136381.10 - phase: 0 /partial
         (986 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|268524498|gb|FM895178.1|FM895178 FM895178 Jatropha curcas emb...   509   e-144

>gi|268524498|gb|FM895178.1|FM895178 FM895178 Jatropha curcas embryo
           71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_001959,
           mRNA sequence
          Length = 597

 Score =  509 bits (257), Expect = e-144
 Identities = 257/257 (100%)
 Strand = Plus / Minus

                                                                       
Query: 690 cctcgagaaatggaggcgcgcagaaattgagaattgtgagatgtacttggcaagcgtgaa 749
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 584 cctcgagaaatggaggcgcgcagaaattgagaattgtgagatgtacttggcaagcgtgaa 525

                                                                       
Query: 750 agctgattgtgatccatctggtatccttatccatccttctggtgctgagctaactcttca 809
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 524 agctgattgtgatccatctggtatccttatccatccttctggtgctgagctaactcttca 465

                                                                       
Query: 810 tgatgctgtaaatggactgagaagtcactacagcgagaaaaagggaaagccatttcggat 869
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 464 tgatgctgtaaatggactgagaagtcactacagcgagaaaaagggaaagccatttcggat 405

                                                                       
Query: 870 ttgggttgatcaggtcatacctacaaaaattggttcagatgcatggctagtaaagttcaa 929
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 404 ttgggttgatcaggtcatacctacaaaaattggttcagatgcatggctagtaaagttcaa 345

                            
Query: 930 tcagtgggaatcatctg 946
           |||||||||||||||||
Sbjct: 344 tcagtgggaatcatctg 328



 Score = 81.8 bits (41), Expect = 1e-15
 Identities = 41/41 (100%)
 Strand = Plus / Minus

                                                    
Query: 946 gaaatctgtggaagcaacttttatgcaccttcatcaaacat 986
           |||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 gaaatctgtggaagcaacttttatgcaccttcatcaaacat 241