Jatropha Genome Database

JcCB0133321.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0133321.10 - phase: 0 
         (537 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|268525942|gb|FM891198.1|FM891198 FM891198 Jatropha curcas emb...   650   0.0  

>gi|268525942|gb|FM891198.1|FM891198 FM891198 Jatropha curcas embryo
           56-70 (DAF) Jatropha curcas cDNA clone rjcaeb0_001316,
           mRNA sequence
          Length = 470

 Score =  650 bits (328), Expect = 0.0
 Identities = 335/336 (99%), Gaps = 1/336 (0%)
 Strand = Plus / Plus

                                                                       
Query: 202 attgtgcgttctccttatggtgtcgtgcatgggaaaagttctcctgtgtattatgatgag 261
           ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 1   attgtgcgttctccttatggtgtcgtgcatgggaaaagt-ctcctgtgtattatgatgag 59

                                                                       
Query: 262 aaaggggaagatggcttgttttctgggttagaaaaccctttcactgctgggagatatcat 321
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 60  aaaggggaagatggcttgttttctgggttagaaaaccctttcactgctgggagatatcat 119

                                                                       
Query: 322 agccttgtgatagaaaaggacagtttcccgagcgaagaactcgagattacagcatggaca 381
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120 agccttgtgatagaaaaggacagtttcccgagcgaagaactcgagattacagcatggaca 179

                                                                       
Query: 382 gaagatggactaataatggctgctcgacacaaaaaatataagcatcttcagggggtgcag 441
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 180 gaagatggactaataatggctgctcgacacaaaaaatataagcatcttcagggggtgcag 239

                                                                       
Query: 442 ttccatccagaaagcattataacatcggaaggcaagagtatcgtccgcaatttcgtgaaa 501
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 ttccatccagaaagcattataacatcggaaggcaagagtatcgtccgcaatttcgtgaaa 299

                                               
Query: 502 atgatagagagaaaagaggctgaatctcagaactag 537
           ||||||||||||||||||||||||||||||||||||
Sbjct: 300 atgatagagagaaaagaggctgaatctcagaactag 335