Jatropha Genome Database

JcCB0130701.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0130701.10 - phase: 0 /partial
         (817 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|268521656|gb|FM896864.1|FM896864 FM896864 Jatropha curcas emb...   283   2e-76
gi|268526427|gb|FM895281.1|FM895281 FM895281 Jatropha curcas emb...   194   1e-49

>gi|268521656|gb|FM896864.1|FM896864 FM896864 Jatropha curcas embryo
           71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_004274,
           mRNA sequence
          Length = 434

 Score =  283 bits (143), Expect = 2e-76
 Identities = 150/151 (99%), Gaps = 1/151 (0%)
 Strand = Plus / Plus

                                                                       
Query: 668 caagcattatatcattggatagagtttccctgaagcaaaaggttgttgatgctcctga-g 726
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1   caagcattatatcattggatagagtttccctgaagcaaaaggttgttgatgctcctgaag 60

                                                                       
Query: 727 atcttgacagtgattgggaagatcccatatctttctgagtttctaaattctttatatgag 786
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  atcttgacagtgattgggaagatcccatatctttctgagtttctaaattctttatatgag 120

                                          
Query: 787 tgccagtacaagtcatttttctcagcatttg 817
           |||||||||||||||||||||||||||||||
Sbjct: 121 tgccagtacaagtcatttttctcagcatttg 151


>gi|268526427|gb|FM895281.1|FM895281 FM895281 Jatropha curcas embryo
           71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_002081,
           mRNA sequence
          Length = 353

 Score =  194 bits (98), Expect = 1e-49
 Identities = 98/98 (100%)
 Strand = Plus / Plus

                                                                       
Query: 720 tcctgagatcttgacagtgattgggaagatcccatatctttctgagtttctaaattcttt 779
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3   tcctgagatcttgacagtgattgggaagatcccatatctttctgagtttctaaattcttt 62

                                                 
Query: 780 atatgagtgccagtacaagtcatttttctcagcatttg 817
           ||||||||||||||||||||||||||||||||||||||
Sbjct: 63  atatgagtgccagtacaagtcatttttctcagcatttg 100