Jatropha Genome Database

JcCB0130451.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0130451.10 + phase: 0 /TE/pseudo/partial
         (1263 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|268520222|gb|FM890070.1|FM890070 FM890070 Jatropha curcas emb...    52   2e-06

>gi|268520222|gb|FM890070.1|FM890070 FM890070 Jatropha curcas embryo
           35-55 (DAF) Jatropha curcas cDNA clone rjcfea0_003862,
           mRNA sequence
          Length = 419

 Score = 52.0 bits (26), Expect = 2e-06
 Identities = 41/46 (89%)
 Strand = Plus / Minus

                                                         
Query: 691 gaggaagtttacatggagcaaccactaggctttgttgctcaggggg 736
           |||||||| || |||||||||||||| || ||||||||||| ||||
Sbjct: 404 gaggaagtatatatggagcaaccacttggttttgttgctcaagggg 359