Jatropha Genome Database

JcCB0125821.20
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0125821.20 - phase: 0 /partial
         (303 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|268521497|gb|FM894249.1|FM894249 FM894249 Jatropha curcas emb...   575   e-164

>gi|268521497|gb|FM894249.1|FM894249 FM894249 Jatropha curcas embryo
           71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_004554,
           mRNA sequence
          Length = 524

 Score =  575 bits (290), Expect = e-164
 Identities = 290/290 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   tacaaatattacattcatacagaagatgcctctgccaagcgacttgcaaaactgtatgtg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19  tacaaatattacattcatacagaagatgcctctgccaagcgacttgcaaaactgtatgtg 78

                                                                       
Query: 61  gctacccttttcactggtagtttaagttggcttttcgatcggatcttttgcaagaacata 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 79  gctacccttttcactggtagtttaagttggcttttcgatcggatcttttgcaagaacata 138

                                                                       
Query: 121 tcaaattggcccatcaatccgcaaggacatgctttgtggcatgtctttatgggttttaat 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 139 tcaaattggcccatcaatccgcaaggacatgctttgtggcatgtctttatgggttttaat 198

                                                                       
Query: 181 tcctattttgcaaacacattcttgatgttttgccgtgcccatcagcgaggatgggcacca 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 199 tcctattttgcaaacacattcttgatgttttgccgtgcccatcagcgaggatgggcacca 258

                                                             
Query: 241 aaggttggctattttggtggtgttcttccatatgtgaagattgagaaatc 290
           ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 aaggttggctattttggtggtgttcttccatatgtgaagattgagaaatc 308