Jatropha Genome Database

JcCB0125201.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0125201.10 + phase: 1 /pseudo/partial
         (1706 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|237680675|gb|GO246887.1|GO246887 JcrME_RL0431 Expressed seque...   714   0.0  

>gi|237680675|gb|GO246887.1|GO246887 JcrME_RL0431 Expressed sequence
            tags from Jatropha curcas root cDNA library Jatropha
            curcas cDNA, mRNA sequence
          Length = 565

 Score =  714 bits (360), Expect = 0.0
 Identities = 360/360 (100%)
 Strand = Plus / Plus

                                                                        
Query: 1347 gctcaacatgtgacagacaagatgatgcaaaatgctgggcatattttccctcataatacc 1406
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7    gctcaacatgtgacagacaagatgatgcaaaatgctgggcatattttccctcataatacc 66

                                                                        
Query: 1407 ccaactaccaaggaagcatactactatagaatgatttttgagagattcttcccacagaac 1466
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 67   ccaactaccaaggaagcatactactatagaatgatttttgagagattcttcccacagaac 126

                                                                        
Query: 1467 tctgccaggctaactgttccaggaggagcaagcgtagcttgcagcacagcgaaagctgtc 1526
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 127  tctgccaggctaactgttccaggaggagcaagcgtagcttgcagcacagcgaaagctgtc 186

                                                                        
Query: 1527 gaatgggacgctacgtggtcgaataatcttgatccttcgggcagggctgcattaggcgtt 1586
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 187  gaatgggacgctacgtggtcgaataatcttgatccttcgggcagggctgcattaggcgtt 246

                                                                        
Query: 1587 catcttgcagcttatgacccccaagcagctgctgccaatccagcaatggtgactccaaat 1646
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247  catcttgcagcttatgacccccaagcagctgctgccaatccagcaatggtgactccaaat 306

                                                                        
Query: 1647 attattgatagcataccaaggatgatggaggttactgctcctgaactcacaatcttaagc 1706
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307  attattgatagcataccaaggatgatggaggttactgctcctgaactcacaatcttaagc 366