Jatropha Genome Database

JcCB0124301.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0124301.10 + phase: 0 /partial
         (450 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|268522602|gb|FM896643.1|FM896643 FM896643 Jatropha curcas emb...    54   1e-07

>gi|268522602|gb|FM896643.1|FM896643 FM896643 Jatropha curcas embryo
           71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_003913,
           mRNA sequence
          Length = 227

 Score = 54.0 bits (27), Expect = 1e-07
 Identities = 82/99 (82%), Gaps = 1/99 (1%)
 Strand = Plus / Plus

                                                                       
Query: 10  aagaagaaaagaaatcttccaggaacaccagatcctgaagcagaagttatagctttatca 69
           |||||||||||||  ||||||||||  ||||| || || |||||||| ||||| ||||| 
Sbjct: 93  aagaagaaaagaagccttccaggaaacccagacccagatgcagaagtgatagcattatct 152

                                                  
Query: 70  ccaaaaactcta-atggctacaaacagattcttatgtga 107
           ||||| ||| ||  | |||||||| |||||| |||||||
Sbjct: 153 ccaaagactttatttagctacaaatagattcgtatgtga 191