Jatropha Genome Database
- JcCB0116941.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0116941.10 + phase: 0
(447 letters)
Database: JAT_13201ests
13,201 sequences; 6,040,684 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|268517028|gb|FM892580.1|FM892580 FM892580 Jatropha curcas emb... 216 2e-56
gi|237679856|gb|GO247161.1|GO247161 JcrME_RL0705 Expressed seque... 214 6e-56
gi|237680740|gb|GO246952.1|GO246952 JcrME_RL0496 Expressed seque... 172 2e-43
gi|237679872|gb|GO247177.1|GO247177 JcrME_RL0721 Expressed seque... 159 3e-39
gi|268519331|gb|FM887798.1|FM887798 FM887798 Jatropha curcas emb... 159 3e-39
gi|268524926|gb|FM895624.1|FM895624 FM895624 Jatropha curcas emb... 141 8e-34
gi|237680778|gb|GO246929.1|GO246929 JcrME_RL0473 Expressed seque... 135 5e-32
gi|237680722|gb|GO246873.1|GO246873 JcrME_RL0417 Expressed seque... 129 3e-30
gi|268523312|gb|FM894078.1|FM894078 FM894078 Jatropha curcas emb... 119 3e-27
gi|268524610|gb|FM895308.1|FM895308 FM895308 Jatropha curcas emb... 84 2e-16
gi|268523389|gb|FM893712.1|FM893712 FM893712 Jatropha curcas emb... 82 6e-16
gi|268525207|gb|FM895849.1|FM895849 FM895849 Jatropha curcas emb... 82 6e-16
gi|268517711|gb|FM893086.1|FM893086 FM893086 Jatropha curcas emb... 80 2e-15
gi|268523892|gb|FM890578.1|FM890578 FM890578 Jatropha curcas emb... 76 4e-14
gi|268517147|gb|FM893495.1|FM893495 FM893495 Jatropha curcas emb... 68 9e-12
gi|268521148|gb|FM891867.1|FM891867 FM891867 Jatropha curcas emb... 64 1e-10
gi|268526214|gb|FM891470.1|FM891470 FM891470 Jatropha curcas emb... 64 1e-10
gi|268518444|gb|FM888718.1|FM888718 FM888718 Jatropha curcas emb... 54 1e-07
gi|268523263|gb|FM894029.1|FM894029 FM894029 Jatropha curcas emb... 54 1e-07
gi|268518754|gb|FM888997.1|FM888997 FM888997 Jatropha curcas emb... 50 2e-06
gi|268519301|gb|FM887768.1|FM887768 FM887768 Jatropha curcas emb... 50 2e-06
gi|268526358|gb|FM891614.1|FM891614 FM891614 Jatropha curcas emb... 50 2e-06
gi|237680561|gb|GO246773.1|GO246773 JcrME_RL0317 Expressed seque... 48 9e-06
>gi|268517028|gb|FM892580.1|FM892580 FM892580 Jatropha curcas embryo
56-70 (DAF) Jatropha curcas cDNA clone rjcaeb0_003173,
mRNA sequence
Length = 553
Score = 216 bits (109), Expect = 2e-56
Identities = 271/325 (83%)
Strand = Plus / Plus
Query: 31 aaggacttgcagagagatcctccaacttcatgcagtgcaggtcctgtagctgaggatatg 90
||||| ||||||| |||||| || ||||| ||||||||||||||||||||||| || |||
Sbjct: 229 aaggatttgcagaaagatccacctacttcttgcagtgcaggtcctgtagctgaagacatg 288
Query: 91 ttccactggcaagctaccatcatcggtccgaatgacagtccatatgctggtggtgttttc 150
|||||||||||||| |||||||| || || | ||| ||||||||||| || ||||| ||
Sbjct: 289 ttccactggcaagcaaccatcatgggaccaactgatagtccatatgcaggaggtgtattt 348
Query: 151 cttgtcactattcatttcccacctgactatcctttcaagcctcccaaggtcgccttcagg 210
|| |||||||| ||||| || || || ||||||||||||||||| ||||| || || |||
Sbjct: 349 ctagtcactatccattttcctccagattatcctttcaagcctccgaaggttgcatttagg 408
Query: 211 actaaggttttccatccaaacatcaatagcaatggaaatatatgtttggacatactcaaa 270
|| ||||| || ||||||||||| || || ||||||| || ||| | || || ||||||
Sbjct: 409 accaaggtgtttcatccaaacataaacagtaatggaagcatttgtcttgatatcctcaaa 468
Query: 271 gaacaatggagtcctgcactcaccatatccaaggttttgctgtccatatgctctttgctt 330
||||||||||| ||||| |||||||| || ||||| ||||| || || ||||| |||||
Sbjct: 469 gaacaatggagccctgctctcaccatttctaaggtattgctatctatttgctcattgctg 528
Query: 331 acagacccaaatcctgatgatccac 355
|| || |||||||| ||||| ||||
Sbjct: 529 actgatccaaatcccgatgacccac 553
>gi|237679856|gb|GO247161.1|GO247161 JcrME_RL0705 Expressed sequence
tags from Jatropha curcas root cDNA library Jatropha
curcas cDNA, mRNA sequence
Length = 700
Score = 214 bits (108), Expect = 6e-56
Identities = 298/360 (82%), Gaps = 1/360 (0%)
Strand = Plus / Plus
Query: 31 aaggacttgcagagagatcctccaacttcatgcagtgcaggtcctgtagctgaggatatg 90
||||| ||||||| |||||| || ||||| ||||||||||||||||||||||| || |||
Sbjct: 324 aaggatttgcagaaagatccacctacttcttgcagtgcaggtcctgtagctgaagacatg 383
Query: 91 ttccactggcaagctaccatcatcggtccgaatgacagtccatatgctggtggtgttttc 150
|||||||||||||| |||||||| || || | ||| ||||||||||| || ||||| ||
Sbjct: 384 ttccactggcaagcaaccatcatgggaccaactgatagtccatatgcaggaggtgtattt 443
Query: 151 cttgtcactattcatttcccacctgactatcctttcaagcctcccaaggtcgccttcagg 210
|| |||||||| ||||| || || || ||||||||||||||||| ||||| || || |||
Sbjct: 444 ctagtcactatccattttcctccagattatcctttcaagcctccgaaggttgcatttagg 503
Query: 211 actaaggttttccatccaaacatcaatagcaatggaaatatatgtttggacatactcaaa 270
|| ||||| || ||||||||||| || || ||||||| || ||| | || || ||||||
Sbjct: 504 accaaggtgtttcatccaaacataaacagtaatggaagcatttgtcttgatatcctcaaa 563
Query: 271 gaacaatggagtcctgcactcaccatatccaa-ggttttgctgtccatatgctctttgct 329
||||||||||| ||||| |||||||| || || ||| ||||| || || ||||| |||||
Sbjct: 564 gaacaatggagccctgctctcaccatttctaagggtattgctatctatttgctcattgct 623
Query: 330 tacagacccaaatcctgatgatccactggttcctgaaattgctcatatgtgcaagactga 389
|| || |||||||| ||||| ||||| || || || ||||| ||||||| ||||||||
Sbjct: 624 gactgatccaaatcccgatgacccacttgtcccagagattgcccatatgtataagactga 683
>gi|237680740|gb|GO246952.1|GO246952 JcrME_RL0496 Expressed sequence
tags from Jatropha curcas root cDNA library Jatropha
curcas cDNA, mRNA sequence
Length = 765
Score = 172 bits (87), Expect = 2e-43
Identities = 318/395 (80%)
Strand = Plus / Plus
Query: 49 cctccaacttcatgcagtgcaggtcctgtagctgaggatatgttccactggcaagctacc 108
|||||| ||||||||||||| || || | ||||| |||||||||||||||||||| ||
Sbjct: 238 cctccagcttcatgcagtgctggcccacttgctgatgatatgttccactggcaagcaaca 297
Query: 109 atcatcggtccgaatgacagtccatatgctggtggtgttttccttgtcactattcatttc 168
||||| ||||| |||||| || | |||||||||||| || |||||| | ||||||||
Sbjct: 298 atcatgggtccagctgacagcccttttgctggtggtgtgtttcttgtctcaattcatttt 357
Query: 169 ccacctgactatcctttcaagcctcccaaggtcgccttcaggactaaggttttccatcca 228
||||| || ||||| |||||||| || ||||| ||||| | || ||||| ||||||||
Sbjct: 358 ccaccagattatccattcaagccaccgaaggtttccttccgtacaaaggtcttccatccc 417
Query: 229 aacatcaatagcaatggaaatatatgtttggacatactcaaagaacaatggagtcctgca 288
|||||||| |||||||||| || ||| | ||||| |||||||| || ||||| |||||
Sbjct: 418 aacatcaacagcaatggaagcatttgtcttgacattctcaaagagcagtggagccctgcc 477
Query: 289 ctcaccatatccaaggttttgctgtccatatgctctttgcttacagacccaaatcctgat 348
|| || ||||||||||| | ||||||| ||||| |||| || || ||||| || |||
Sbjct: 478 cttactatatccaaggtccttttgtccatctgctcactgctgactgatccaaacccagat 537
Query: 349 gatccactggttcctgaaattgctcatatgtgcaagactgacaaagtcaagtacgattct 408
||||| ||||| ||||| |||||||| |||| |||||| || | || |||||| || ||
Sbjct: 538 gatccgctggtgcctgagattgctcacatgtacaagacggatagagccaagtatgaggct 597
Query: 409 actgctaggagctggacccaaaagtatgctatggg 443
|||||| | ||||||||| || ||||| |||||
Sbjct: 598 actgctcgatcctggacccagaaatatgcaatggg 632
>gi|237679872|gb|GO247177.1|GO247177 JcrME_RL0721 Expressed sequence
tags from Jatropha curcas root cDNA library Jatropha
curcas cDNA, mRNA sequence
Length = 650
Score = 159 bits (80), Expect = 3e-39
Identities = 251/308 (81%)
Strand = Plus / Plus
Query: 46 gatcctccaacttcatgcagtgcaggtcctgtagctgaggatatgttccactggcaagct 105
|||||||| || |||||||| || ||||| || ||||| || ||||| || |||||||||
Sbjct: 122 gatcctcccacatcatgcagcgctggtcccgttgctgaagacatgtttcattggcaagct 181
Query: 106 accatcatcggtccgaatgacagtccatatgctggtggtgttttccttgtcactattcat 165
|| ||||| ||||| ||||||||||||||| || |||||||||||||| |||||||||
Sbjct: 182 acgatcatgggtccccctgacagtccatatgcagggggtgttttccttgttactattcat 241
Query: 166 ttcccacctgactatcctttcaagcctcccaaggtcgccttcaggactaaggttttccat 225
||||| || || ||||| || |||||||||||||| || ||||| || ||||| |||||
Sbjct: 242 ttccctccggattatccatttaagcctcccaaggtggctttcagaacaaaggtattccac 301
Query: 226 ccaaacatcaatagcaatggaaatatatgtttggacatactcaaagaacaatggagtcct 285
||||| || || ||||| || | || ||| | |||||| | || || |||||||| |||
Sbjct: 302 ccaaatattaacagcaacgggagcatttgtcttgacatattgaaggagcaatggagccct 361
Query: 286 gcactcaccatatccaaggttttgctgtccatatgctctttgcttacagacccaaatcct 345
|| || |||||||| ||||| ||||| || || || |||||| | || || || ||||||
Sbjct: 362 gctctaaccatatctaaggtgttgctttcaatttgttctttgttgacggatcccaatcct 421
Query: 346 gatgatcc 353
||||||||
Sbjct: 422 gatgatcc 429
>gi|268519331|gb|FM887798.1|FM887798 FM887798 Jatropha curcas embryo
35-55 (DAF) Jatropha curcas cDNA clone rjcfea0_001065,
mRNA sequence
Length = 538
Score = 159 bits (80), Expect = 3e-39
Identities = 251/308 (81%)
Strand = Plus / Plus
Query: 46 gatcctccaacttcatgcagtgcaggtcctgtagctgaggatatgttccactggcaagct 105
|||||||| || |||||||| || ||||| || ||||| || ||||| || |||||||||
Sbjct: 113 gatcctcccacatcatgcagcgctggtcccgttgctgaagacatgtttcattggcaagct 172
Query: 106 accatcatcggtccgaatgacagtccatatgctggtggtgttttccttgtcactattcat 165
|| ||||| ||||| ||||||||||||||| || |||||||||||||| |||||||||
Sbjct: 173 acgatcatgggtccccctgacagtccatatgcagggggtgttttccttgttactattcat 232
Query: 166 ttcccacctgactatcctttcaagcctcccaaggtcgccttcaggactaaggttttccat 225
||||| || || ||||| || |||||||||||||| || ||||| || ||||| |||||
Sbjct: 233 ttccctccggattatccatttaagcctcccaaggtggctttcagaacaaaggtattccac 292
Query: 226 ccaaacatcaatagcaatggaaatatatgtttggacatactcaaagaacaatggagtcct 285
||||| || || ||||| || | || ||| | |||||| | || || |||||||| |||
Sbjct: 293 ccaaatattaacagcaacgggagcatttgtcttgacatattgaaggagcaatggagccct 352
Query: 286 gcactcaccatatccaaggttttgctgtccatatgctctttgcttacagacccaaatcct 345
|| || |||||||| ||||| ||||| || || || |||||| | || || || ||||||
Sbjct: 353 gctctaaccatatctaaggtgttgctttcaatttgttctttgttgacggatcccaatcct 412
Query: 346 gatgatcc 353
||||||||
Sbjct: 413 gatgatcc 420
>gi|268524926|gb|FM895624.1|FM895624 FM895624 Jatropha curcas embryo
71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_002576,
mRNA sequence
Length = 674
Score = 141 bits (71), Expect = 8e-34
Identities = 224/275 (81%)
Strand = Plus / Plus
Query: 79 gctgaggatatgttccactggcaagctaccatcatcggtccgaatgacagtccatatgct 138
||||| || ||||| || ||||||||||| ||||| ||||| |||||||||||||||
Sbjct: 6 gctgaagacatgtttcattggcaagctacgatcatgggtccccctgacagtccatatgca 65
Query: 139 ggtggtgttttccttgtcactattcatttcccacctgactatcctttcaagcctcccaag 198
|| |||||||||||||| |||||||||||||| || || ||||| || ||||||||||||
Sbjct: 66 gggggtgttttccttgttactattcatttccctccggattatccatttaagcctcccaag 125
Query: 199 gtcgccttcaggactaaggttttccatccaaacatcaatagcaatggaaatatatgtttg 258
|| || ||||| || ||||| ||||| ||||| || || ||||| || | || ||| |
Sbjct: 126 gtggctttcagaacaaaggtattccacccaaatattaacagcaacgggagcatttgtctt 185
Query: 259 gacatactcaaagaacaatggagtcctgcactcaccatatccaaggttttgctgtccata 318
|||||| | || || |||||||| ||||| || |||||||| ||||| ||||| || ||
Sbjct: 186 gacatattgaaggagcaatggagccctgctctaaccatatctaaggtgttgctttcaatt 245
Query: 319 tgctctttgcttacagacccaaatcctgatgatcc 353
|| |||||| | || || || ||||||||||||||
Sbjct: 246 tgttctttgttgacggatcccaatcctgatgatcc 280
>gi|237680778|gb|GO246929.1|GO246929 JcrME_RL0473 Expressed sequence
tags from Jatropha curcas root cDNA library Jatropha
curcas cDNA, mRNA sequence
Length = 585
Score = 135 bits (68), Expect = 5e-32
Identities = 155/184 (84%)
Strand = Plus / Plus
Query: 46 gatcctccaacttcatgcagtgcaggtcctgtagctgaggatatgttccactggcaagct 105
|||||||| || |||||||| || ||||| || ||||| || ||||| || |||||||||
Sbjct: 115 gatcctcccacatcatgcagcgctggtcccgttgctgaagacatgtttcattggcaagct 174
Query: 106 accatcatcggtccgaatgacagtccatatgctggtggtgttttccttgtcactattcat 165
|| ||||| ||||| ||||||||||||||| || |||||||||||||| |||||||||
Sbjct: 175 acgatcatgggtccccctgacagtccatatgcagggggtgttttccttgttactattcat 234
Query: 166 ttcccacctgactatcctttcaagcctcccaaggtcgccttcaggactaaggttttccat 225
||||| || || ||||| || |||||||||||||| || |||| ||| ||||| |||||
Sbjct: 235 ttccctccggattatccatttaagcctcccaaggtggctttcaagaccaaggtattccac 294
Query: 226 ccaa 229
||||
Sbjct: 295 ccaa 298
>gi|237680722|gb|GO246873.1|GO246873 JcrME_RL0417 Expressed sequence
tags from Jatropha curcas root cDNA library Jatropha
curcas cDNA, mRNA sequence
Length = 600
Score = 129 bits (65), Expect = 3e-30
Identities = 156/185 (84%), Gaps = 1/185 (0%)
Strand = Plus / Plus
Query: 46 gatcctccaacttcatgcagtgcaggtcctgtagctgaggatatgttccactggcaagct 105
|||||||| || |||||||| || ||||| || ||||| || ||||| || |||||||||
Sbjct: 166 gatcctcccacatcatgcagcgctggtcccgttgctgaagacatgtttcattggcaagct 225
Query: 106 accatcatcggtccgaatgacagtccatatgctggtggtgttttccttgtcactattcat 165
|| ||||| ||||| ||||||||||||||| || |||||||||||||| |||||||||
Sbjct: 226 acgatcatgggtccccctgacagtccatatgcagggggtgttttccttgttactattcat 285
Query: 166 ttcccacctgactatcctttcaagcctcccaaggtcgccttcaggactaaggttttccat 225
||||| || || ||||| || |||||||||||||| || ||||| || ||||| |||||
Sbjct: 286 ttccctccggattatccatttaagcctcccaaggtggctttcagaac-aaggtattccac 344
Query: 226 ccaaa 230
|||||
Sbjct: 345 ccaaa 349
>gi|268523312|gb|FM894078.1|FM894078 FM894078 Jatropha curcas embryo
56-70 (DAF) Jatropha curcas cDNA clone rjcaeb0_005051,
mRNA sequence
Length = 582
Score = 119 bits (60), Expect = 3e-27
Identities = 174/212 (82%)
Strand = Plus / Minus
Query: 178 tatcctttcaagcctcccaaggtcgccttcaggactaaggttttccatccaaacatcaat 237
||||||||||||||||| ||||| || || ||||| ||||| || ||||||||||| ||
Sbjct: 576 tatcctttcaagcctccgaaggttgcatttaggaccaaggtgtttcatccaaacataaac 517
Query: 238 agcaatggaaatatatgtttggacatactcaaagaacaatggagtcctgcactcaccata 297
|| ||||||| || ||| | || || ||||||||||||||||| ||||| ||||||||
Sbjct: 516 agtaatggaagcatttgtcttgatatcctcaaagaacaatggagccctgctctcaccatt 457
Query: 298 tccaaggttttgctgtccatatgctctttgcttacagacccaaatcctgatgatccactg 357
|| ||||| ||||| || || ||||| ||||| || || |||||||| ||||| |||||
Sbjct: 456 tctaaggtattgctatctatttgctcattgctgactgatccaaatcccgatgacccactt 397
Query: 358 gttcctgaaattgctcatatgtgcaagactga 389
|| || || ||||| ||||||| ||||||||
Sbjct: 396 gtcccagagattgcccatatgtataagactga 365
>gi|268524610|gb|FM895308.1|FM895308 FM895308 Jatropha curcas embryo
71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_002115,
mRNA sequence
Length = 541
Score = 83.8 bits (42), Expect = 2e-16
Identities = 95/113 (84%)
Strand = Plus / Minus
Query: 334 gacccaaatcctgatgatccactggttcctgaaattgctcatatgtgcaagactgacaaa 393
|||||||| || |||||||| |||| || ||||||||||| |||| |||||| ||||
Sbjct: 408 gacccaaacccagatgatcctntggtgccagaaattgctcacatgtacaagacagacagg 349
Query: 394 gtcaagtacgattctactgctaggagctggacccaaaagtatgctatgggata 446
| ||||||||| | ||||||||||||||||| || |||||||| ||||||||
Sbjct: 348 gccaagtacgaggcaactgctaggagctggacacagaagtatgccatgggata 296
>gi|268523389|gb|FM893712.1|FM893712 FM893712 Jatropha curcas embryo
56-70 (DAF) Jatropha curcas cDNA clone rjcaeb0_004617,
mRNA sequence
Length = 420
Score = 81.8 bits (41), Expect = 6e-16
Identities = 104/125 (83%)
Strand = Plus / Plus
Query: 265 ctcaaagaacaatggagtcctgcactcaccatatccaaggttttgctgtccatatgctct 324
||||||||||||||||| ||||| |||||||| || ||||| ||||| || || |||||
Sbjct: 44 ctcaaagaacaatggagccctgctctcaccatttctaaggtattgctatctatttgctca 103
Query: 325 ttgcttacagacccaaatcctgatgatccactggttcctgaaattgctcatatgtgcaag 384
||||| || || |||||||| ||||| ||||| || || || ||||| ||||||| |||
Sbjct: 104 ttgctgactgatccaaatcccgatgacccacttgtcccagagattgcccatatgtataag 163
Query: 385 actga 389
|||||
Sbjct: 164 actga 168
>gi|268525207|gb|FM895849.1|FM895849 FM895849 Jatropha curcas embryo
71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_002845,
mRNA sequence
Length = 448
Score = 81.8 bits (41), Expect = 6e-16
Identities = 95/113 (84%)
Strand = Plus / Minus
Query: 334 gacccaaatcctgatgatccactggttcctgaaattgctcatatgtgcaagactgacaaa 393
|||||||| || |||||||| |||| || ||||||||||| |||| |||||| ||||
Sbjct: 406 gacccaaacccagatgatcccttggtgccagaaattgctcacatgtacaagacagacagg 347
Query: 394 gtcaagtacgattctactgctaggagctggacccaaaagtatgctatgggata 446
| ||||||||| | ||||||||||||||||| || |||||||| ||||||||
Sbjct: 346 gccaagtacgaggcaactgctaggagctggacacagaagtatgccatgggata 294
>gi|268517711|gb|FM893086.1|FM893086 FM893086 Jatropha curcas embryo
56-70 (DAF) Jatropha curcas cDNA clone rjcaeb0_003867,
mRNA sequence
Length = 287
Score = 79.8 bits (40), Expect = 2e-15
Identities = 76/88 (86%)
Strand = Plus / Plus
Query: 158 ctattcatttcccacctgactatcctttcaagcctcccaaggtcgccttcaggactaagg 217
||||||||||||| ||||| |||||||| |||||||| ||||| || || ||||| || |
Sbjct: 153 ctattcatttccctcctgattatccttttaagcctcctaaggttgcatttaggacaaaag 212
Query: 218 ttttccatccaaacatcaatagcaatgg 245
| |||||||||||||| ||||| |||||
Sbjct: 213 tcttccatccaaacattaatagtaatgg 240
>gi|268523892|gb|FM890578.1|FM890578 FM890578 Jatropha curcas embryo
56-70 (DAF) Jatropha curcas cDNA clone rjcaeb0_000466,
mRNA sequence
Length = 444
Score = 75.8 bits (38), Expect = 4e-14
Identities = 101/122 (82%)
Strand = Plus / Minus
Query: 268 aaagaacaatggagtcctgcactcaccatatccaaggttttgctgtccatatgctctttg 327
|||||||||||||| ||||| |||||||| || ||||| ||||| || || ||||| |||
Sbjct: 444 aaagaacaatggagccctgctctcaccatttctaaggtattgctatctatttgctcattg 385
Query: 328 cttacagacccaaatcctgatgatccactggttcctgaaattgctcatatgtgcaagact 387
|| || || |||||||| ||||| ||||| || || || ||||| ||||||| ||||||
Sbjct: 384 ctgactgatccaaatcccgatgacccacttgtcccagagattgcccatatgtataagact 325
Query: 388 ga 389
||
Sbjct: 324 ga 323
>gi|268517147|gb|FM893495.1|FM893495 FM893495 Jatropha curcas embryo
56-70 (DAF) Jatropha curcas cDNA clone rjcaeb0_004333,
mRNA sequence
Length = 237
Score = 67.9 bits (34), Expect = 9e-12
Identities = 82/98 (83%)
Strand = Plus / Plus
Query: 49 cctccaacttcatgcagtgcaggtcctgtagctgaggatatgttccactggcaagctacc 108
|||||| ||||||||||||| || || | ||||| |||||||||||||||||||| ||
Sbjct: 139 cctccagcttcatgcagtgctggcccacttgctgatgatatgttccactggcaagcaaca 198
Query: 109 atcatcggtccgaatgacagtccatatgctggtggtgt 146
||||| ||||| |||||| || | ||||||||||||
Sbjct: 199 atcatgggtcccgctgacagcccttttgctggtggtgt 236
>gi|268521148|gb|FM891867.1|FM891867 FM891867 Jatropha curcas embryo
56-70 (DAF) Jatropha curcas cDNA clone rjcaeb0_002266,
mRNA sequence
Length = 352
Score = 63.9 bits (32), Expect = 1e-10
Identities = 158/200 (79%)
Strand = Plus / Plus
Query: 46 gatcctccaacttcatgcagtgcaggtcctgtagctgaggatatgttccactggcaagct 105
|||||||| || || ||||| ||||| ||||| || || || |||||||| ||||||||
Sbjct: 116 gatcctcctacctcttgcagcgcaggccctgttgcggaagacatgttccattggcaagca 175
Query: 106 accatcatcggtccgaatgacagtccatatgctggtggtgttttccttgtcactattcat 165
|| || || ||||| ||| ||||||||||| ||||| || || || || || ||||||
Sbjct: 176 acaattatgggtcctcctgatagtccatatgcaggtggagtgtttctagtgacgattcat 235
Query: 166 ttcccacctgactatcctttcaagcctcccaaggtcgccttcaggactaaggttttccat 225
|| || || |||||||| || || || || ||||| || |||||||| ||||| || ||
Sbjct: 236 tttcctccagactatccatttaaaccaccgaaggttgcattcaggacaaaggtctttcac 295
Query: 226 ccaaacatcaatagcaatgg 245
|| || ||||| ||||||||
Sbjct: 296 cccaatatcaacagcaatgg 315
>gi|268526214|gb|FM891470.1|FM891470 FM891470 Jatropha curcas embryo
56-70 (DAF) Jatropha curcas cDNA clone rjcaeb0_001769,
mRNA sequence
Length = 532
Score = 63.9 bits (32), Expect = 1e-10
Identities = 158/200 (79%)
Strand = Plus / Plus
Query: 46 gatcctccaacttcatgcagtgcaggtcctgtagctgaggatatgttccactggcaagct 105
|||||||| || || ||||| ||||| ||||| || || || |||||||| ||||||||
Sbjct: 174 gatcctcctacctcttgcagcgcaggccctgttgcggaagacatgttccattggcaagca 233
Query: 106 accatcatcggtccgaatgacagtccatatgctggtggtgttttccttgtcactattcat 165
|| || || ||||| ||| ||||||||||| ||||| || || || || || ||||||
Sbjct: 234 acaattatgggtcctcctgatagtccatatgcaggtggagtgtttctagtgacgattcat 293
Query: 166 ttcccacctgactatcctttcaagcctcccaaggtcgccttcaggactaaggttttccat 225
|| || || |||||||| || || || || ||||| || |||||||| ||||| || ||
Sbjct: 294 tttcctccagactatccatttaaaccaccgaaggttgcattcaggacaaaggtctttcac 353
Query: 226 ccaaacatcaatagcaatgg 245
|| || ||||| ||||||||
Sbjct: 354 cccaatatcaacagcaatgg 373
>gi|268518444|gb|FM888718.1|FM888718 FM888718 Jatropha curcas embryo
35-55 (DAF) Jatropha curcas cDNA clone rjcfea0_002180,
mRNA sequence
Length = 457
Score = 54.0 bits (27), Expect = 1e-07
Identities = 132/167 (79%)
Strand = Plus / Plus
Query: 277 tggagtcctgcactcaccatatccaaggttttgctgtccatatgctctttgcttacagac 336
||||| ||||| || ||||| |||||||| ||||| || || || ||| | | || |||
Sbjct: 132 tggagccctgcccttaccatttccaaggtgttgctttcaatttgttctctattgacggac 191
Query: 337 ccaaatcctgatgatccactggttcctgaaattgctcatatgtgcaagactgacaaagtc 396
||||||||||| ||||| |||| || |||||||| || |||| |||||||| | |
Sbjct: 192 ccaaatcctgacgatccgttggtgccagaaattgcccacatgtataagactgataggagc 251
Query: 397 aagtacgattctactgctaggagctggacccaaaagtatgctatggg 443
|| ||||| | || || |||||||||||||| ||||||||||||||
Sbjct: 252 aaatacgaggcaacagcaaggagctggacccagaagtatgctatggg 298
>gi|268523263|gb|FM894029.1|FM894029 FM894029 Jatropha curcas embryo
56-70 (DAF) Jatropha curcas cDNA clone rjcaeb0_004993,
mRNA sequence
Length = 430
Score = 54.0 bits (27), Expect = 1e-07
Identities = 132/167 (79%)
Strand = Plus / Minus
Query: 277 tggagtcctgcactcaccatatccaaggttttgctgtccatatgctctttgcttacagac 336
||||| ||||| || ||||| |||||||| ||||| || || || ||| | | || |||
Sbjct: 389 tggagccctgcccttaccatttccaaggtgttgctttcaatttgttctctattgacggac 330
Query: 337 ccaaatcctgatgatccactggttcctgaaattgctcatatgtgcaagactgacaaagtc 396
||||||||||| ||||| |||| || |||||||| || |||| |||||||| | |
Sbjct: 329 ccaaatcctgacgatccgttggtgccagaaattgcccacatgtataagactgataggagc 270
Query: 397 aagtacgattctactgctaggagctggacccaaaagtatgctatggg 443
|| ||||| | || || |||||||||||||| ||||||||||||||
Sbjct: 269 aaatacgaggcaacagcaaggagctggacccagaagtatgctatggg 223
>gi|268518754|gb|FM888997.1|FM888997 FM888997 Jatropha curcas embryo
35-55 (DAF) Jatropha curcas cDNA clone rjcfea0_002544,
mRNA sequence
Length = 258
Score = 50.1 bits (25), Expect = 2e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 415 aggagctggacccaaaagtatgctatggg 443
|||||||||||||| ||||||||||||||
Sbjct: 9 aggagctggacccagaagtatgctatggg 37
>gi|268519301|gb|FM887768.1|FM887768 FM887768 Jatropha curcas embryo
35-55 (DAF) Jatropha curcas cDNA clone rjcfea0_001032,
mRNA sequence
Length = 254
Score = 50.1 bits (25), Expect = 2e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 415 aggagctggacccaaaagtatgctatggg 443
|||||||||||||| ||||||||||||||
Sbjct: 4 aggagctggacccagaagtatgctatggg 32
>gi|268526358|gb|FM891614.1|FM891614 FM891614 Jatropha curcas embryo
56-70 (DAF) Jatropha curcas cDNA clone rjcaeb0_001939,
mRNA sequence
Length = 375
Score = 50.1 bits (25), Expect = 2e-06
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 415 aggagctggacccaaaagtatgctatggg 443
|||||||||||||| ||||||||||||||
Sbjct: 265 aggagctggacccagaagtatgctatggg 237
>gi|237680561|gb|GO246773.1|GO246773 JcrME_RL0317 Expressed sequence
tags from Jatropha curcas root cDNA library Jatropha
curcas cDNA, mRNA sequence
Length = 684
Score = 48.1 bits (24), Expect = 9e-06
Identities = 66/80 (82%)
Strand = Plus / Minus
Query: 274 caatggagtcctgcactcaccatatccaaggttttgctgtccatatgctctttgcttaca 333
|||||||| ||||| || |||||||| ||||| ||||| || || || |||||| | ||
Sbjct: 478 caatggagccctgctctaaccatatctaaggtgttgctttcaatttgttctttgttgacg 419
Query: 334 gacccaaatcctgatgatcc 353
|| || ||||||||||||||
Sbjct: 418 gatcccaatcctgatgatcc 399