Jatropha Genome Database

JcCB0112721.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0112721.10 - phase: 0 /pseudo
         (987 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|268518762|gb|FM889005.1|FM889005 FM889005 Jatropha curcas emb...   365   e-101

>gi|268518762|gb|FM889005.1|FM889005 FM889005 Jatropha curcas embryo
           35-55 (DAF) Jatropha curcas cDNA clone rjcfea0_002555,
           mRNA sequence
          Length = 507

 Score =  365 bits (184), Expect = e-101
 Identities = 184/184 (100%)
 Strand = Plus / Plus

                                                                       
Query: 714 cgggaagattttggggaatgttgatacaaatcaattgaaaaacaccatggctactgtatc 773
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   cgggaagattttggggaatgttgatacaaatcaattgaaaaacaccatggctactgtatc 60

                                                                       
Query: 774 accaaatgggcgttttattgctgctgcggcattcactgcagatgtgaaggtctgggagat 833
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  accaaatgggcgttttattgctgctgcggcattcactgcagatgtgaaggtctgggagat 120

                                                                       
Query: 834 tgtgtattcaaaggatggatctgtcaaggaggttccaaaagttatgcagcttaaaggaca 893
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tgtgtattcaaaggatggatctgtcaaggaggttccaaaagttatgcagcttaaaggaca 180

               
Query: 894 caag 897
           ||||
Sbjct: 181 caag 184