Jatropha Genome Database

JcCB0108421.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0108421.10 - phase: 0 /partial
         (1275 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|268522097|gb|FM892937.1|FM892937 FM892937 Jatropha curcas emb...   535   e-152

>gi|268522097|gb|FM892937.1|FM892937 FM892937 Jatropha curcas embryo
            56-70 (DAF) Jatropha curcas cDNA clone rjcaeb0_003672,
            mRNA sequence
          Length = 593

 Score =  535 bits (270), Expect = e-152
 Identities = 270/270 (100%)
 Strand = Plus / Plus

                                                                        
Query: 965  ctcctaacctctctctccgagctgccgtacaggcattccgccgggaagaggagttacaat 1024
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5    ctcctaacctctctctccgagctgccgtacaggcattccgccgggaagaggagttacaat 64

                                                                        
Query: 1025 tttatcgctcatccaaacgaaggagagagaggtttgaccaggataaaggtgtttatggtg 1084
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 65   tttatcgctcatccaaacgaaggagagagaggtttgaccaggataaaggtgtttatggtg 124

                                                                        
Query: 1085 attcaactgcaacagataccccaaggggtcggggtgtgcagttccctttcgctgtaacag 1144
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 125  attcaactgcaacagataccccaaggggtcggggtgtgcagttccctttcgctgtaacag 184

                                                                        
Query: 1145 accgggttattataaagggaaacaagaggacgccacaacggtttgttgggcgtgaggctg 1204
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 185  accgggttattataaagggaaacaagaggacgccacaacggtttgttgggcgtgaggctg 244

                                          
Query: 1205 ttgtgacaactcagtgcttaaatggatggt 1234
            ||||||||||||||||||||||||||||||
Sbjct: 245  ttgtgacaactcagtgcttaaatggatggt 274