Jatropha Genome Database

JcCB0108161.20
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0108161.20 - phase: 0 
         (1545 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|268518358|gb|FM888632.1|FM888632 FM888632 Jatropha curcas emb...   450   e-126

>gi|268518358|gb|FM888632.1|FM888632 FM888632 Jatropha curcas embryo
            35-55 (DAF) Jatropha curcas cDNA clone rjcfea0_002077,
            mRNA sequence
          Length = 315

 Score =  450 bits (227), Expect = e-126
 Identities = 227/227 (100%)
 Strand = Plus / Minus

                                                                        
Query: 1319 ttaatgaatctaaaaggcacttggcttggtttttcccatttggattaggccccagaatct 1378
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315  ttaatgaatctaaaaggcacttggcttggtttttcccatttggattaggccccagaatct 256

                                                                        
Query: 1379 gtgctggtcaaaatttagccattgttgaagcaaaaattatcctagccatcattatcagac 1438
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255  gtgctggtcaaaatttagccattgttgaagcaaaaattatcctagccatcattatcagac 196

                                                                        
Query: 1439 atttttcttttgtgctgccaccaacatatgttcatgctcctatgctccttgtaaccttga 1498
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 195  atttttcttttgtgctgccaccaacatatgttcatgctcctatgctccttgtaaccttga 136

                                                           
Query: 1499 tgccccaatacggtgcacagatcatctttagcagaatttcaagttga 1545
            |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 135  tgccccaatacggtgcacagatcatctttagcagaatttcaagttga 89