Jatropha Genome Database

JcCB0105731.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0105731.10 + phase: 0 /partial
         (339 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|268517933|gb|FM893308.1|FM893308 FM893308 Jatropha curcas emb...   113   1e-25

>gi|268517933|gb|FM893308.1|FM893308 FM893308 Jatropha curcas embryo
           56-70 (DAF) Jatropha curcas cDNA clone rjcaeb0_004108,
           mRNA sequence
          Length = 332

 Score =  113 bits (57), Expect = 1e-25
 Identities = 69/73 (94%)
 Strand = Plus / Minus

                                                                       
Query: 140 tgcaagtaggaagggtgagggtattgctgaagagggaagatgggactttgtacaacccag 199
           ||||| |||||||| ||||||||||||||||||| |||||||||||||||||||| ||||
Sbjct: 332 tgcaaataggaaggttgagggtattgctgaagagtgaagatgggactttgtacaatccag 273

                        
Query: 200 ccattcctactag 212
           |||||||||||||
Sbjct: 272 ccattcctactag 260