Jatropha Genome Database
- JcCB0097621.30
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0097621.30 + phase: 0
(861 letters)
Database: JAT_13201ests
13,201 sequences; 6,040,684 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|237680585|gb|GO246736.1|GO246736 JcrME_RL0280 Expressed seque... 609 e-174
gi|268517039|gb|FM892591.1|FM892591 FM892591 Jatropha curcas emb... 143 4e-34
>gi|237680585|gb|GO246736.1|GO246736 JcrME_RL0280 Expressed sequence
tags from Jatropha curcas root cDNA library Jatropha
curcas cDNA, mRNA sequence
Length = 705
Score = 609 bits (307), Expect = e-174
Identities = 357/371 (96%), Gaps = 2/371 (0%)
Strand = Plus / Plus
Query: 1 atggatccttcaagagtttcattactattgttgcttacatactttagctctttgatattg 60
|||| |||||||||||||||||||||||| |||||| |||| ||||||||||||||||||
Sbjct: 91 atggctccttcaagagtttcattactattattgcttgcatattttagctctttgatattg 150
Query: 61 gctgcattgggtggtaacttctaccaagattttgacattacttggggagatggccgcgct 120
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 151 gttgcattgggtggtaacttctaccaagattttgacattacttggggagatggccgcgct 210
Query: 121 aagatactcaacaatggccagcttcttacacttaacctagacaaagcctccggttctgga 180
|||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||
Sbjct: 211 aagatactcaacaatggccagcttcttacactgaaccttgacaaagcctccggttctgga 270
Query: 181 tttcaatccaggaatgagtatttgttcggaaagattgacatgcaactcaagcttgttcct 240
|||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 271 tttcaatcaaggaatgagtatttgtttggaaagattgacatgcaactcaagcttgttcct 330
Query: 241 ggcaattctgcgggcacggtcactgcctattatctatcctcaaaaggttctacttgggat 300
||||||||||| |||||||||||||||||||||||||||| ||||| ||||||||||||
Sbjct: 331 ggcaattctgc-agcacggtcactgcctattatctatcctc-aaagggtctacttgggat 388
Query: 301 gagatagattttgagttcttgggaaatttgagtggagatccttacattcttcacaccaat 360
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 gagatagactttgagttcttgggaaatttgagtggagatccttacattcttcacaccaat 448
Query: 361 gtgtttagcca 371
|||||||||||
Sbjct: 449 gtgtttagcca 459
>gi|268517039|gb|FM892591.1|FM892591 FM892591 Jatropha curcas embryo
56-70 (DAF) Jatropha curcas cDNA clone rjcaeb0_003186,
mRNA sequence
Length = 556
Score = 143 bits (72), Expect = 4e-34
Identities = 302/376 (80%), Gaps = 2/376 (0%)
Strand = Plus / Plus
Query: 281 caaaaggttctacttgggatgagatagattttgagttcttgggaaatttgagtggagatc 340
||||||| ||| | ||||||||||||||||||||||||||||||||| | ||||| ||||
Sbjct: 5 caaaagggtcttcatgggatgagatagattttgagttcttgggaaatctaagtggtgatc 64
Query: 341 cttacattcttcacaccaatgtgtttagccaaggcaaaggaaacagagagcaacaatttt 400
|||||| | |||| || ||||| | | ||||||||| | |||||||||||||||||
Sbjct: 65 cttacactgttcatactaatgtaatcactcaaggcaaacgcgacagagagcaacaatttc 124
Query: 401 atttatggtttgacccaactgctgatttccacacctattccattctttggaattcccaac 460
|| | ||||| || ||||||| |||||||| |||||||||||||| ||||| ||| |
Sbjct: 125 atctctggttcgatccaactgtggatttccatacctattccattctctggaa-tcctctc 183
Query: 461 gc-attatcttctccgttgatggcaccccgattagagaattcaagaacttggaatccgca 519
|| ||| ||||| | ||||||| || || || ||| |||||||||||||| ||||
Sbjct: 184 gcaattgtcttcctcattgatgggacacccataagacaattcaagaacttgaaatctaag 243
Query: 520 ggagttccatttccaaagagtcaaccaatgagaatctactcaagtctgtggaatgcagat 579
|| ||| ||| ||||| | ||||| ||||| ||||| |||||||||||||| |||
Sbjct: 244 ggcattcaattcccaaacaaccaaccgatgaggcagtactccagtctgtggaatgctgat 303
Query: 580 gattgggctacaagaggtggtcttgtgaagacagattggagtcaagctcccttcactgct 639
||||||||||||||||| || | | || ||||||||||| | ||||| ||||||||
Sbjct: 304 gattgggctacaagagggggggtcatcaaaacagattggagatatgctcctttcactgca 363
Query: 640 tcttacaggaacttca 655
|||| |||||| ||||
Sbjct: 364 tctttcaggaatttca 379