Jatropha Genome Database

JcCB0097241.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0097241.10 + phase: 0 
         (231 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|237680748|gb|GO246960.1|GO246960 JcrME_RL0504 Expressed seque...   450   e-127
gi|237681032|gb|GO247668.1|GO247668 JcrME_RL1212 Expressed seque...   450   e-127

>gi|237680748|gb|GO246960.1|GO246960 JcrME_RL0504 Expressed sequence
           tags from Jatropha curcas root cDNA library Jatropha
           curcas cDNA, mRNA sequence
          Length = 395

 Score =  450 bits (227), Expect = e-127
 Identities = 230/231 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   atgaattccatctttagctccttcgatgctctctgcgccgaattgttaggccaaacaatc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 atgaattccatctttagctccttcgatgctctctgcgccgaattgttaggccaaacaatc 324

                                                                       
Query: 61  aagtcctcttttgcatctgcaacttcttatcgcttgctcaggaacccagagcagagaacc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 aagtcctcttttgcatctgcaacttcttatcgcttgctcaggaacccagagcagagaacc 264

                                                                       
Query: 121 tcatcgccgccacaggaaacaaatcaacggcaccagcaaccgctaaggcccccgagattt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 263 tcatcgccgccacaggaaacaaatcaacggcaccagcaaccgctaaggcccccgagaatt 204

                                                              
Query: 181 gcaccggagcttgatggcctcaactgtttcgagacccttatcaactattga 231
           |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 gcaccggagcttgatggcctcaactgtttcgagacccttatcaactattga 153


>gi|237681032|gb|GO247668.1|GO247668 JcrME_RL1212 Expressed sequence
           tags from Jatropha curcas root cDNA library Jatropha
           curcas cDNA, mRNA sequence
          Length = 387

 Score =  450 bits (227), Expect = e-127
 Identities = 230/231 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   atgaattccatctttagctccttcgatgctctctgcgccgaattgttaggccaaacaatc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 atgaattccatctttagctccttcgatgctctctgcgccgaattgttaggccaaacaatc 294

                                                                       
Query: 61  aagtcctcttttgcatctgcaacttcttatcgcttgctcaggaacccagagcagagaacc 120
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 293 aagtcctcttttgcatcagcaacttcttatcgcttgctcaggaacccagagcagagaacc 234

                                                                       
Query: 121 tcatcgccgccacaggaaacaaatcaacggcaccagcaaccgctaaggcccccgagattt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 233 tcatcgccgccacaggaaacaaatcaacggcaccagcaaccgctaaggcccccgagattt 174

                                                              
Query: 181 gcaccggagcttgatggcctcaactgtttcgagacccttatcaactattga 231
           |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 173 gcaccggagcttgatggcctcaactgtttcgagacccttatcaactattga 123