Jatropha Genome Database

JcCB0094931.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0094931.10 - phase: 0 
         (423 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|268523170|gb|FM893936.1|FM893936 FM893936 Jatropha curcas emb...   456   e-129

>gi|268523170|gb|FM893936.1|FM893936 FM893936 Jatropha curcas embryo
           56-70 (DAF) Jatropha curcas cDNA clone rjcaeb0_004884,
           mRNA sequence
          Length = 438

 Score =  456 bits (230), Expect = e-129
 Identities = 236/238 (99%)
 Strand = Plus / Plus

                                                                       
Query: 55  ggcgatatgtttactgaagaacagaatgagctggtggaatctgcagcagagatgctgtat 114
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62  ggcgatatgtttactgaagaacagaatgagctggtggaatctgcagcagagatgctgtat 121

                                                                       
Query: 115 ggtttaatccatgtgcgatatatactgactaccaagggaatggctgcgatgttagagaag 174
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 122 ggtttaatccatgtgcgatatatactgactaccaatggaatggctgcgatgttagagaag 181

                                                                       
Query: 175 tacaaaaattatgactttgggagatgcccaagagtttactgctgtggacagccctgcctt 234
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 tacaaaaattatgactttgggagatgcccaagagtttactgctgtggacagccctgcctt 241

                                                                     
Query: 235 ccggttggtcaatcagacattcctcgttcaagcactgttaaaatctactgtccaaagt 292
           |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 242 ccggttggtcaatcagacatacctcgttcaagcactgttaaaatctactgtccaaagt 299



 Score =  198 bits (100), Expect = 4e-51
 Identities = 100/100 (100%)
 Strand = Plus / Plus

                                                                       
Query: 293 acattgatggagcttattttggaacgacgtttcctcacctatttctgatgacgtatgggc 352
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 acattgatggagcttattttggaacgacgtttcctcacctatttctgatgacgtatgggc 398

                                                   
Query: 353 acctgaagccacaaaaggcagcacagagctacgtacctag 392
           ||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 acctgaagccacaaaaggcagcacagagctacgtacctag 438