Jatropha Genome Database
- JcCB0091771.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0091771.10 - phase: 0 /partial
(882 letters)
Database: JAT_13201ests
13,201 sequences; 6,040,684 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|262091254|gb|GT228681.1|GT228681 JC246 Jatropha seeds from fr... 920 0.0
gi|237680456|gb|GO246668.1|GO246668 JcrME_RL0212 Expressed seque... 72 1e-12
>gi|262091254|gb|GT228681.1|GT228681 JC246 Jatropha seeds from
fruits at three stages of maturation Jatropha curcas
cDNA clone PL04SE.G05.scf 5', mRNA sequence
Length = 522
Score = 920 bits (464), Expect = 0.0
Identities = 515/532 (96%), Gaps = 10/532 (1%)
Strand = Plus / Plus
Query: 30 cattatgtccgggttgtttggtaatctactagtggacaacttggggcttggtgctgttgc 89
|||||||| ||| ||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cattatgtacggattgtt-ggtaatctactagtggacaacttggggcttggtgctgttgc 59
Query: 90 tccatttgatgctgctgcatgctttcttgcaattggcatggcaatcatattgtcatcatg 149
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 60 tccatttgatgctgctgcatgctttcttgcaattggcatggcaatcatattgtcatcatg 119
Query: 150 gaccgaaaattatggagacccttcagaaaacaaggacttgctttcccagttcaaggctgc 209
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120 gaccgaaaattatggagacccttcagaaaacaaggacttgctttcccagttcaaggctgc 179
Query: 210 tgctgttgccattgcttctggtgaaatccatgagaaaattgcattgttgggtgccattca 269
|||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 180 tgctgttgccattgcttctg---------atgagaaaattgcattgttgggtgccattca 230
Query: 270 atccctttttgaaggttcaatgtacacctttgtgttcctttggactccttctttgagccc 329
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 231 atccctttttgaaggttcaatgtacacctttgtgttcctttggactccttctttgagccc 290
Query: 330 aaatggtgaggaaataccgcatggtttcatttttgcaacattcatgctggcttcaatgtt 389
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 291 aaatggtgaggaaataccgcgtggtttcatttttgcaacattcatgctggcttcaatgtt 350
Query: 390 gggaagctccattgcatctcgattaatggctcactcatccccaaaagttgagagctatat 449
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 gggaagctccattgcatctcgattaatggctcactcatccccaaaagttgagagctatat 410
Query: 450 gcagattgtttttgtaatctctgcagcttcacttctgcttcctgtaataacaagtttctt 509
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 411 gcagattgtttttgtaatctctgccgcttcacttctgcttcctgtaataacaagtttctt 470
Query: 510 gatagtaccaactggagtgaaaggtggatcaatctcattttctgggtgtgtt 561
||| ||||||||||||||||||||||||||| |||| |||||||||||||||
Sbjct: 471 gatcgtaccaactggagtgaaaggtggatcactctccttttctgggtgtgtt 522
>gi|237680456|gb|GO246668.1|GO246668 JcrME_RL0212 Expressed sequence
tags from Jatropha curcas root cDNA library Jatropha
curcas cDNA, mRNA sequence
Length = 576
Score = 71.9 bits (36), Expect = 1e-12
Identities = 54/60 (90%)
Strand = Plus / Minus
Query: 745 atgtttggcatgtgctccattttcctctttgtggcatctcttttacagaggcgactcatg 804
||||| ||||||||||| ||||||||||||||||||||| | || |||||||| ||||||
Sbjct: 483 atgttcggcatgtgctcgattttcctctttgtggcatctatcttgcagaggcggctcatg 424