Jatropha Genome Database

JcCB0091031.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0091031.10 + phase: 0 
         (648 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|262090975|gb|GT229333.1|GT229333 JC898 Jatropha seeds from fr...   640   0.0  
gi|268524527|gb|FM895207.1|FM895207 FM895207 Jatropha curcas emb...    54   2e-07

>gi|262090975|gb|GT229333.1|GT229333 JC898 Jatropha seeds from
           fruits at three stages of maturation Jatropha curcas
           cDNA clone PL22SE.C01.scf 5', mRNA sequence
          Length = 532

 Score =  640 bits (323), Expect = 0.0
 Identities = 326/327 (99%)
 Strand = Plus / Plus

                                                                       
Query: 322 actggagaaatgatgacgccaacggatacctataatttaggaatgcaccatatgccatac 381
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18  actggagaaatgatgacgccaacggatacctataatttaggaatgcaccatatgccatac 77

                                                                       
Query: 382 acccaatcttccttctttctgccccagtctcaaactaggatagttaacagccaaaacatg 441
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 78  acccaatcttccttctttctgccccagtctcaaactaggatagttaacagccaaaacatg 137

                                                                       
Query: 442 cagatgcctcagtttcattcgttccagtccaacatgtcaactccacttcaacctatggga 501
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 138 cagatgcctcagtttcattcgttccagtccaacatgtcaactccacttcaacctatggga 197

                                                                       
Query: 502 ggttcatctcattcacatgccttcccggatatgttgcagcaggatcctttgggacgattg 561
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 198 ggttcatctcattcacatgccttcccggatatgttgcagcaggatcctttgggacgattg 257

                                                                       
Query: 562 caggggcttgatataagtagcagaagcacgcttgtagttaaatctgagggtccgtcactt 621
           |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 258 caggggcttgatataagtagcagaagcacgcttgtaattaaatctgagggtccgtcactt 317

                                      
Query: 622 tctgccagcgaaagcagcagcctttga 648
           |||||||||||||||||||||||||||
Sbjct: 318 tctgccagcgaaagcagcagcctttga 344


>gi|268524527|gb|FM895207.1|FM895207 FM895207 Jatropha curcas embryo
           71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_001990,
           mRNA sequence
          Length = 560

 Score = 54.0 bits (27), Expect = 2e-07
 Identities = 42/47 (89%)
 Strand = Plus / Plus

                                                          
Query: 67  aatcggcagtctgctgctcggtcaaaagaaaggaaagcccgctatat 113
           |||||||||||||||||||| || ||||| ||||| ||||| |||||
Sbjct: 501 aatcggcagtctgctgctcgttctaaagagaggaaggcccgatatat 547