Jatropha Genome Database

JcCB0089711.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0089711.10 + phase: 0 
         (210 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|237681013|gb|GO247649.1|GO247649 JcrME_RL1193 Expressed seque...   416   e-117
gi|262091172|gb|GT228599.1|GT228599 JC164 Jatropha seeds from fr...   408   e-114

>gi|237681013|gb|GO247649.1|GO247649 JcrME_RL1193 Expressed sequence
           tags from Jatropha curcas root cDNA library Jatropha
           curcas cDNA, mRNA sequence
          Length = 417

 Score =  416 bits (210), Expect = e-117
 Identities = 210/210 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggatgccttggactccgtcttcgatcctctcagagagttcgccaaggacagtgtacgc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14  atggatgccttggactccgtcttcgatcctctcagagagttcgccaaggacagtgtacgc 73

                                                                       
Query: 61  cttgttaagaggtgccacaagcctgatcgcaaagaattcacgaaggtcgcgttccgtact 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 74  cttgttaagaggtgccacaagcctgatcgcaaagaattcacgaaggtcgcgttccgtact 133

                                                                       
Query: 121 gcaattggtttcgtggtgatgggattcgtcggattcttcgtgaagttgatcttcattccg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134 gcaattggtttcgtggtgatgggattcgtcggattcttcgtgaagttgatcttcattccg 193

                                         
Query: 181 atcaacaacattatcgtcggttctagttag 210
           ||||||||||||||||||||||||||||||
Sbjct: 194 atcaacaacattatcgtcggttctagttag 223


>gi|262091172|gb|GT228599.1|GT228599 JC164 Jatropha seeds from
           fruits at three stages of maturation Jatropha curcas
           cDNA clone PL01SE.E09.scf 5', mRNA sequence
          Length = 594

 Score =  408 bits (206), Expect = e-114
 Identities = 209/210 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggatgccttggactccgtcttcgatcctctcagagagttcgccaaggacagtgtacgc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 151 atggatgccttggactccgtcttcgatcctctcagagagttcgccaaggacagtgtacgc 210

                                                                       
Query: 61  cttgttaagaggtgccacaagcctgatcgcaaagaattcacgaaggtcgcgttccgtact 120
           |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 211 cttgttaagaggtgccacaagcctgatcgcaaagaattcacgaaggtcgcgtaccgtact 270

                                                                       
Query: 121 gcaattggtttcgtggtgatgggattcgtcggattcttcgtgaagttgatcttcattccg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 gcaattggtttcgtggtgatgggattcgtcggattcttcgtgaagttgatcttcattccg 330

                                         
Query: 181 atcaacaacattatcgtcggttctagttag 210
           ||||||||||||||||||||||||||||||
Sbjct: 331 atcaacaacattatcgtcggttctagttag 360