Jatropha Genome Database

JcCB0088711.30
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0088711.30 - phase: 0 
         (1545 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|237680795|gb|GO247007.1|GO247007 JcrME_RL0551 Expressed seque...    66   1e-10

>gi|237680795|gb|GO247007.1|GO247007 JcrME_RL0551 Expressed sequence
           tags from Jatropha curcas root cDNA library Jatropha
           curcas cDNA, mRNA sequence
          Length = 700

 Score = 65.9 bits (33), Expect = 1e-10
 Identities = 75/89 (84%)
 Strand = Plus / Plus

                                                                       
Query: 97  catgcagtatgtatcccattcccaacccaaggccatataaaccctatgctaaaactcgca 156
           |||||||| || |||||||  ||| | ||||||||||||||||||||||||||||| || 
Sbjct: 92  catgcagtttgcatcccatatccagctcaaggccatataaaccctatgctaaaactagcc 151

                                        
Query: 157 aagcttcttcaccgaaaaggctttcatat 185
           || ||||| || |  |||||||| |||||
Sbjct: 152 aaacttctccatcacaaaggcttccatat 180