Jatropha Genome Database

JcCB0084921.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0084921.10 - phase: 1 /pseudo
         (1171 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|268522962|gb|FM896405.1|FM896405 FM896405 Jatropha curcas emb...   773   0.0  

>gi|268522962|gb|FM896405.1|FM896405 FM896405 Jatropha curcas embryo
            71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_003621,
            mRNA sequence
          Length = 415

 Score =  773 bits (390), Expect = 0.0
 Identities = 397/398 (99%), Gaps = 1/398 (0%)
 Strand = Plus / Plus

                                                                        
Query: 667  tcctgaagaaggatccttcaaccccaggaagtttaggaatagctatttcagaagctgtgg 726
            |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 19   tcctgaagaaggatccttca-ccccaggaagtttaggaatagctatttcagaagctgtgg 77

                                                                        
Query: 727  aggttgcagctacaaatgctgatactaaatattgcttaggcagtgtacttaatcatgttt 786
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 78   aggttgcagctacaaatgctgatactaaatattgcttaggcagtgtacttaatcatgttt 137

                                                                        
Query: 787  tattacaccaaactattatgggtgaggagtgccttaagcaaatggaagctataggtgaaa 846
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 138  tattacaccaaactattatgggtgaggagtgccttaagcaaatggaagctataggtgaaa 197

                                                                        
Query: 847  ctcctgatatgataataggatgtacgggtggtgggtctaattttgcaggacttagtttcc 906
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 198  ctcctgatatgataataggatgtacgggtggtgggtctaattttgcaggacttagtttcc 257

                                                                        
Query: 907  cattcattagagaaaagcttaatgggaaaataaaccctgttataagagctgttgaacctg 966
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258  cattcattagagaaaagcttaatgggaaaataaaccctgttataagagctgttgaacctg 317

                                                                        
Query: 967  cagcatgtccttcgctcacaaaaggtgtttatgcttatgattatggtgatacggctggga 1026
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318  cagcatgtccttcgctcacaaaaggtgtttatgcttatgattatggtgatacggctggga 377

                                                  
Query: 1027 tgactccattgatgaagatgcacactcttggccatgac 1064
            ||||||||||||||||||||||||||||||||||||||
Sbjct: 378  tgactccattgatgaagatgcacactcttggccatgac 415