Jatropha Genome Database

JcCB0081401.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0081401.10 + phase: 0 /partial
         (656 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|268518112|gb|FM888386.1|FM888386 FM888386 Jatropha curcas emb...   379   e-105

>gi|268518112|gb|FM888386.1|FM888386 FM888386 Jatropha curcas embryo
           35-55 (DAF) Jatropha curcas cDNA clone rjcfea0_001791,
           mRNA sequence
          Length = 585

 Score =  379 bits (191), Expect = e-105
 Identities = 194/195 (99%)
 Strand = Plus / Plus

                                                                       
Query: 462 gccagggcaccttcctgatcttaagatgatggctttatttggttgtggggctttgctttt 521
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7   gccaaggcaccttcctgatcttaagatgatggctttatttggttgtggggctttgctttt 66

                                                                       
Query: 522 gaggggtgctggatgtacaataaatgatctccttgatagagatattgataccaaggtgga 581
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 67  gaggggtgctggatgtacaataaatgatctccttgatagagatattgataccaaggtgga 126

                                                                       
Query: 582 acgtacaaagttgagacccattgcaagtggtcttctgacaccatttcaagggctttgttt 641
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 127 acgtacaaagttgagacccattgcaagtggtcttctgacaccatttcaagggctttgttt 186

                          
Query: 642 tcttggttttcaatt 656
           |||||||||||||||
Sbjct: 187 tcttggttttcaatt 201