Jatropha Genome Database

JcCB0071491.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0071491.10 - phase: 2 /partial
         (1159 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|268518688|gb|FM888931.1|FM888931 FM888931 Jatropha curcas emb...   674   0.0  

>gi|268518688|gb|FM888931.1|FM888931 FM888931 Jatropha curcas embryo
            35-55 (DAF) Jatropha curcas cDNA clone rjcfea0_002453,
            mRNA sequence
          Length = 473

 Score =  674 bits (340), Expect = 0.0
 Identities = 346/348 (99%)
 Strand = Plus / Plus

                                                                        
Query: 678  ctggattggcaccttttagaggatttctacaggaaagaatggccttgaagcaggagggcg 737
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1    ctggattggcaccttttagaggatttctacaggaaagaatggccttgaagcaggagggcg 60

                                                                        
Query: 738  ctcaacttggtcctgctctgctcttctttggatgtagaaatcgtcgaatggatttcatat 797
            |||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61   ctcggcttggtcctgctctgctcttctttggatgtagaaatcgtcgaatggatttcatat 120

                                                                        
Query: 798  atgaggatgaactcaataatttcgtagaacaaggtgtgatatctgagttgattgttgcat 857
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121  atgaggatgaactcaataatttcgtagaacaaggtgtgatatctgagttgattgttgcat 180

                                                                        
Query: 858  tctcaagagaggggccacaaaaggagtatgttcaacataagatggtgcagaaagcagcac 917
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181  tctcaagagaggggccacaaaaggagtatgttcaacataagatggtgcagaaagcagcac 240

                                                                        
Query: 918  aaatatgggccataatttctcagggcggatacctttatgtctgtggtgatgcaaagggta 977
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241  aaatatgggccataatttctcagggcggatacctttatgtctgtggtgatgcaaagggta 300

                                                            
Query: 978  tggccagagacgtccaccgtactttgcataatattgttcaggagcagg 1025
            ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301  tggccagagacgtccaccgtactttgcataatattgttcaggagcagg 348