Jatropha Genome Database

JcCB0071481.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0071481.10 + phase: 1 /partial
         (436 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|268522545|gb|FM896549.1|FM896549 FM896549 Jatropha curcas emb...   414   e-116

>gi|268522545|gb|FM896549.1|FM896549 FM896549 Jatropha curcas embryo
           71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_003784,
           mRNA sequence
          Length = 615

 Score =  414 bits (209), Expect = e-116
 Identities = 209/209 (100%)
 Strand = Plus / Plus

                                                                       
Query: 228 cctaaaggtgctggaaatgacttgtccaggccacaagatacggatgctaatggattggtt 287
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   cctaaaggtgctggaaatgacttgtccaggccacaagatacggatgctaatggattggtt 60

                                                                       
Query: 288 ggaatccactctagcacgcaaaagaaatctggtgttcccatgaagtcaactacaagtgga 347
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  ggaatccactctagcacgcaaaagaaatctggtgttcccatgaagtcaactacaagtgga 120

                                                                       
Query: 348 tcatcaagagaacagtcagaagatgatgaaaatgaaggagaaactgagatgaatatgaag 407
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tcatcaagagaacagtcagaagatgatgaaaatgaaggagaaactgagatgaatatgaag 180

                                        
Query: 408 gaccctgctgatgcaaaacgtgtaaggag 436
           |||||||||||||||||||||||||||||
Sbjct: 181 gaccctgctgatgcaaaacgtgtaaggag 209