Jatropha Genome Database

JcCB0068881.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0068881.10 + phase: 1 /partial
         (1568 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|268517484|gb|FM889195.1|FM889195 FM889195 Jatropha curcas emb...   892   0.0  

>gi|268517484|gb|FM889195.1|FM889195 FM889195 Jatropha curcas embryo
           35-55 (DAF) Jatropha curcas cDNA clone rjcfea0_002787,
           mRNA sequence
          Length = 476

 Score =  892 bits (450), Expect = 0.0
 Identities = 466/470 (99%), Gaps = 1/470 (0%)
 Strand = Plus / Plus

                                                                       
Query: 365 tcttattcaggcattggttgctgcgtgttgcttga-gaagtgatgaaagtcttctgcttg 423
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 7   tcttattcaggcattggttgctgcgtgttgcttgacgaagtgatgaaagtcttctgcttg 66

                                                                       
Query: 424 cagaagtctatgatcacaggatttatcgtctatttgaaaatccttttgaatcattgactt 483
           | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 67  cggaagtctatgatcacaggatttatcgtctatttgaaaatccttttgaatcattgactt 126

                                                                       
Query: 484 ctataaaagatgaagaatatattgttgcataccggctttctcagaagggaataggaaaaa 543
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 127 ctataaaagatgaagaatatattgttgcataccggctttctcagaagggaataggaaaaa 186

                                                                       
Query: 544 ggaaactggaaattgttcaccaggaaaggtctgcaccagactttgtgaaaggcagtggat 603
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 187 ggaaactggaaattgttcaccaggaaaggtctgcaccagactttgtgaaaggcagtggat 246

                                                                       
Query: 604 tcaaagattttggagcacctctggttacttacttggacgatgacccgccaagtggagctg 663
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 tcaaagattttggagcacctctggttacttacttggacgatgacccgccaagtggagctg 306

                                                                       
Query: 664 atattgagttggcggcttctagacttctctcacccttgattagaacatgctcatctaatg 723
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 atattgagttggcggcttctagacttctctcacccttgattagaacatgctcatctaatg 366

                                                                       
Query: 724 cagttcattgtggaaaggaaaatggttttctttcagaatctaatggtgaaacatcaaatt 783
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 367 cagttcattgtggaaaggaaaatggttttctttcagaatctaatggtgaaacatccaatt 426

                                                             
Query: 784 gctgcaacggtcatgctgaattaggagaccggtcaatggacactatggaa 833
           ||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 427 gctgcaacggtcatgctgaattaggagaccggtcactggacactatggaa 476