Jatropha Genome Database

JcCB0066311.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0066311.10 - phase: 0 /partial
         (730 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|268525442|gb|FM896084.1|FM896084 FM896084 Jatropha curcas emb...   811   0.0  

>gi|268525442|gb|FM896084.1|FM896084 FM896084 Jatropha curcas embryo
           71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_003227,
           mRNA sequence
          Length = 553

 Score =  811 bits (409), Expect = 0.0
 Identities = 409/409 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggtaacaagaacagtcgatctccgctctgacactgtcactaaaccaaccgaagcgatg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 145 atggtaacaagaacagtcgatctccgctctgacactgtcactaaaccaaccgaagcgatg 204

                                                                       
Query: 61  agagcagctatggcaaacgctgaggttgatgatgatgttctgggagatgacccaaacgcc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 agagcagctatggcaaacgctgaggttgatgatgatgttctgggagatgacccaaacgcc 264

                                                                       
Query: 121 ttacgattacagaccgaaatggccagaatcatgggcaaggaagcagctctatttgttcca 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ttacgattacagaccgaaatggccagaatcatgggcaaggaagcagctctatttgttcca 324

                                                                       
Query: 181 tcaggcactatgggtaaccttattagtgtgcttgtgcattgtgacattagaggaagtgaa 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tcaggcactatgggtaaccttattagtgtgcttgtgcattgtgacattagaggaagtgaa 384

                                                                       
Query: 241 gtcattcttggacacgattctcatatccacatatatgagaatggaggcatttcaacactc 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gtcattcttggacacgattctcatatccacatatatgagaatggaggcatttcaacactc 444

                                                                       
Query: 301 ggtggtgtgcatccaaggacagtgaagaataacaaggatggaacaatggatatcgattta 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ggtggtgtgcatccaaggacagtgaagaataacaaggatggaacaatggatatcgattta 504

                                                            
Query: 361 attgaagctgccatcagagatccgaaatggcagcttgtgtatccaacta 409
           |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 attgaagctgccatcagagatccgaaatggcagcttgtgtatccaacta 553