Jatropha Genome Database

JcCB0065691.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0065691.10 - phase: 0 
         (402 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|268522908|gb|FM896351.1|FM896351 FM896351 Jatropha curcas emb...   731   0.0  

>gi|268522908|gb|FM896351.1|FM896351 FM896351 Jatropha curcas embryo
           71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_003555,
           mRNA sequence
          Length = 518

 Score =  731 bits (369), Expect = 0.0
 Identities = 387/393 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggccgccagttcgagccgaggcggttccttctatggcggcgctgctccctatagatcg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 atggccgccagttcgagccgaggcggttccttctatggcggcgctgctccctatagatcg 181

                                                                       
Query: 61  aaggatgggctcagcacgagaccggcggcgagctccgatgaaatacaattacggattgat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 aaggatgggctcagcacgagaccggcggcgagctccgatgaaatacaattacggattgat 241

                                                                       
Query: 121 ccgatgcacgctgacttcgatgacgagatctctggtctccgtagccaagttaagcaattg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 ccgatgcacgctgacttcgatgacgagatctctggtctccgtagccaagttaagcaattg 301

                                                                       
Query: 181 agaaatgtggctcaagagataggatcagaagcaaagttccagaaggatttcttggatcag 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 agaaatgtggctcaagagataggatcagaagcaaagttccagaaggatttcttggatcag 361

                                                                       
Query: 241 ctgcaaatgactgtgataaaagctcaagcaggtgtgaagaataacataaggaaattgaac 300
           |||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 ctgcaaatgactgtgcataaagctcaagcaggtgtgaagaataacataaggaaattgaac 421

                                                                       
Query: 301 aagagcatcattaagaatggtggaaaccatatcgtccacgtggttctttttgcactccta 360
            |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 422 cagagcatcattaagaatggtggaaaccatatcgtccacgtggttctttatgcactccta 481

                                            
Query: 361 tgtttcactgtggtctacctgtggtccaaagta 393
           ||||||||||||||||||||||||| |||||||
Sbjct: 482 tgtttcactgtggtctacctgtggttcaaagta 514