Jatropha Genome Database
- JcCB0060001.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0060001.10 + phase: 0
(1224 letters)
Database: JAT_13201ests
13,201 sequences; 6,040,684 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|268522835|gb|FM896278.1|FM896278 FM896278 Jatropha curcas emb... 954 0.0
gi|237680941|gb|GO247066.1|GO247066 JcrME_RL0610 Expressed seque... 860 0.0
>gi|268522835|gb|FM896278.1|FM896278 FM896278 Jatropha curcas embryo
71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_003469,
mRNA sequence
Length = 523
Score = 954 bits (481), Expect = 0.0
Identities = 481/481 (100%)
Strand = Plus / Plus
Query: 1 atggcaatttgcacagtctacactacccaatccctgaactcaacatgcaccatctccaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 43 atggcaatttgcacagtctacactacccaatccctgaactcaacatgcaccatctccaca 102
Query: 61 ccaggaaaaacccacttgggttttaaccagaaacatgttgtgtttctaaatagtagttgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 103 ccaggaaaaacccacttgggttttaaccagaaacatgttgtgtttctaaatagtagttgt 162
Query: 121 gggaagagaaatagcaaaagaggtagcagtagcttcataagctgctcatcagaaggttca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 163 gggaagagaaatagcaaaagaggtagcagtagcttcataagctgctcatcagaaggttca 222
Query: 181 gagacagtggtgattggtttagcagcagattctggatgtggaaagagtactttcatgaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 223 gagacagtggtgattggtttagcagcagattctggatgtggaaagagtactttcatgaga 282
Query: 241 agattgacaagtgtatttggaggagcagcagagccaccaaaaggagggaatcctgactca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 agattgacaagtgtatttggaggagcagcagagccaccaaaaggagggaatcctgactca 342
Query: 301 aacacacttataagtgacacaactactgttatttgtttagatgattatcactcacttgat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 aacacacttataagtgacacaactactgttatttgtttagatgattatcactcacttgat 402
Query: 361 agaactggaaggaaggaaaaaggagtcacagcacttgacccaagagccaacgattttgat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 agaactggaaggaaggaaaaaggagtcacagcacttgacccaagagccaacgattttgat 462
Query: 421 cttatgtatgaacaggttaaggctatcaaagaaggaattcctgttgagaaacccatctac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 463 cttatgtatgaacaggttaaggctatcaaagaaggaattcctgttgagaaacccatctac 522
Query: 481 a 481
|
Sbjct: 523 a 523
>gi|237680941|gb|GO247066.1|GO247066 JcrME_RL0610 Expressed sequence
tags from Jatropha curcas root cDNA library Jatropha
curcas cDNA, mRNA sequence
Length = 638
Score = 860 bits (434), Expect = 0.0
Identities = 478/487 (98%), Gaps = 8/487 (1%)
Strand = Plus / Minus
Query: 738 aaagcaatacgctgatgctgtaatagaagttttgccaacccaactgattccagatgacaa 797
||||| ||||||||||||||||||||||||| ||||||| |||||| ||||||||||
Sbjct: 588 aaagccatacgctgatgctgtaatagaagtt--gccaacc--actgat--cagatgacaa 535
Query: 798 tgaagggaaggttttaagagtgcgattgataatgaaagaaggggttaaatatttcagtcc 857
|||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 534 tgaagggaaggttt-aagagtgcgat-gataatgaaagaaggggttaaatatttcagtcc 477
Query: 858 agtttacttgtttgatgaaggctcaaccatttcttggataccatgtgggaggaagctcac 917
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 476 agtttacttgtttgatgaaggctcaaccatttcttggataccatgtgggaggaagctcac 417
Query: 918 ctgctcttaccctggcatcaaatttgcttatgctcctgacacttattttggccatgaggt 977
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 416 ctgctcttaccctggcatcaaatttgcttatgctcctgacacttattttggccatgaggt 357
Query: 978 ctctgtactggagatggatgggcaatttgacagattagatgagctgatttacgtggaaag 1037
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 ctctgtactggagatggatgggcaatttgacagattagatgagctgatttacgtggaaag 297
Query: 1038 ccatttaagtaacatctctaccaagttctatggggaagtgacacagcaaatgttgaagca 1097
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 296 ccatttaagtaacatctctaccaagttctatggggaagtgacacagcaaatgttgaagca 237
Query: 1098 tgctgatttccctggaagtaacaacgggacaggtcttttccaaacaattgtcggtttaaa 1157
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 236 tgctgatttccctggaagtaacaacgggacaggtcttttccaaacaattgtcggtttaaa 177
Query: 1158 aataagagatctctatgagcaaattgttgccagtaaggccaagactcctgtagaagccaa 1217
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 176 aataagagatctctatgagcaaattgttgccagtaaggccaagactcctgtagaagccaa 117
Query: 1218 agcctaa 1224
|||||||
Sbjct: 116 agcctaa 110