Jatropha Genome Database
- JcCB0058331.20
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0058331.20 - phase: 0
(945 letters)
Database: JAT_13201ests
13,201 sequences; 6,040,684 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|268522797|gb|FM896240.1|FM896240 FM896240 Jatropha curcas emb... 440 e-123
gi|268519220|gb|FM887687.1|FM887687 FM887687 Jatropha curcas emb... 329 3e-90
>gi|268522797|gb|FM896240.1|FM896240 FM896240 Jatropha curcas embryo
71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_003428,
mRNA sequence
Length = 230
Score = 440 bits (222), Expect = e-123
Identities = 229/230 (99%), Gaps = 1/230 (0%)
Strand = Plus / Plus
Query: 448 gtagctgaaactttgatgtttgattatcatagacaacatggcattgagatacgaattgcc 507
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtagctgaaactttgatgtttgattatcatagacaacatggcattgagatacgaattgcc 60
Query: 508 agaatttttaacacttatggacccc-ggatgaacattgatgatgggcgagttgttagcaa 566
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 61 agaatttttaacacttatggaccccnggatgaacattgatgatgggcgagttgttagcaa 120
Query: 567 tttcatagcccaagcagtgcgtaatgagcctttgactgttcaagcaccaggaacacaaac 626
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tttcatagcccaagcagtgcgtaatgagcctttgactgttcaagcaccaggaacacaaac 180
Query: 627 caggagtttctgttatgtttctgacatggttgatggtcttattcggttga 676
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 caggagtttctgttatgtttctgacatggttgatggtcttattcggttga 230
>gi|268519220|gb|FM887687.1|FM887687 FM887687 Jatropha curcas embryo
35-55 (DAF) Jatropha curcas cDNA clone rjcfea0_000934,
mRNA sequence
Length = 551
Score = 329 bits (166), Expect = 3e-90
Identities = 423/509 (83%)
Strand = Plus / Plus
Query: 61 atggaaaatgaaaagaatgaggtgattgttgtggacaacttctttactggttcaaaggat 120
||||||||||| || ||||| || || ||||| || |||| ||||||||| ||||||||
Sbjct: 34 atggaaaatgagaaaaatgaagtaatagttgtngataactactttactggatcaaaggac 93
Query: 121 aatataaggaaatggattggtcatccaagatttgaactgattcgccatgatgtcaccgag 180
||| | | | |||||||| || ||||||||||| || ||||||||||||||||| |||
Sbjct: 94 aatcttaaacagtggattggccacccaagatttgagctcattcgccatgatgtcacggag 153
Query: 181 ccattgctcattgaggttgaccaaatttaccaccttgcttgccctgcttctccaatcttc 240
|||||| | ||||||||||| || |||||||| || || ||||||||||| || || |||
Sbjct: 154 ccattgttgattgaggttgatcagatttaccatctagcatgccctgcttcccccattttc 213
Query: 241 tacaaatacaatcctgtaaagactataaagacaaatgtgattggtacattgaacatgttg 300
|| ||||| |||||||||||||| ||||| |||||||||||||| ||| | || ||||||
Sbjct: 214 tataaatataatcctgtaaagacaataaaaacaaatgtgattggcacactaaatatgttg 273
Query: 301 gggcttgccaagcgtgttggtgcaaggattttgctgacatcaacttcggaggtgtatggc 360
|| ||||||||||| ||||| || || |||||||| ||||||||||| ||||| |||||
Sbjct: 274 ggtcttgccaagcgagttggggctagaattttgcttacatcaacttcagaggtatatggt 333
Query: 361 gatccgcttgaacaccctcagactgagagctactggggaaatgtcaatccaattggagtc 420
||||| ||| |||||||| | |||| ||||||||| ||||| || || ||||| ||
Sbjct: 334 gatcctcttattcaccctcaaccagagacctactggggcaatgttaaccctattggggtt 393
Query: 421 agaagttgctatgacgagggaaagcgagtagctgaaactttgatgtttgattatcataga 480
|| || || ||||| || |||||||| ||||||| |||||||||||||||||||| ||
Sbjct: 394 aggagctgttatgatgaaggaaagcgtatagctgagactttgatgtttgattatcacagg 453
Query: 481 caacatggcattgagatacgaattgccagaatttttaacacttatggaccccggatgaac 540
||||||||| | || || || || || |||||||||||||| |||||||| || |||||
Sbjct: 454 caacatggcctagaaattcgcatcgctagaatttttaacacatatggaccacgcatgaat 513
Query: 541 attgatgatgggcgagttgttagcaattt 569
||||| |||||||| ||||| ||||||||
Sbjct: 514 attgacgatgggcgtgttgtcagcaattt 542