Jatropha Genome Database

JcCB0047491.20
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0047491.20 + phase: 0 /partial
         (958 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|268522815|gb|FM896258.1|FM896258 FM896258 Jatropha curcas emb...  1059   0.0  

>gi|268522815|gb|FM896258.1|FM896258 FM896258 Jatropha curcas embryo
           71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_003448,
           mRNA sequence
          Length = 571

 Score = 1059 bits (534), Expect = 0.0
 Identities = 543/546 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggcccctcctccagctgctgctgccatggaataccaagaaagtgctccaagtaacact 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 26  atggcccctcctccagctgctgctgccatggaataccaagaaagtgctccaagtaacact 85

                                                                       
Query: 61  tttaccatcaacgatggctctggtgctgcttctggtgcttttcacatgtctaaagtcact 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 86  tttaccatcaacgatggctctggtgctgcttctggtgcttttcacatgtctaaagtcact 145

                                                                       
Query: 121 gttgtgggtagtggcaattggggtagtgttgctgctaagctcattgcttctaacactctc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 146 gttgtgggtagtggcaattggggtagtgttgctgctaagctcattgcttctaacactctc 205

                                                                       
Query: 181 aagctcacatcttttcacgatgaagtaaggatgtgggtgtttgaagaggcgttaccaagt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 aagctcacatcttttcacgatgaagtaaggatgtgggtgtttgaagaggcgttaccaagt 265

                                                                       
Query: 241 ggtgagaagctaacagatgtcattaatcgaaccaatgaaaatgttaaatatctccctggt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 ggtgagaagctaacagatgtcattaatcgaaccaatgaaaatgttaaatatctccctggt 325

                                                                       
Query: 301 ataaagcttggtaaaaatgttgttgcagaccctgatcttgataatgcagtgagggatgca 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 ataaagcttggtaaaaatgttgttgcagaccctgatcttgataatgcagtgagggatgca 385

                                                                       
Query: 361 aacatgttggtatttgtgactccacatcagtttatggagggtatatgcaaaaggcttgtt 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 aacatgttggtatttgtgactccacatcagtttatggagggtatatgcaaaaggcttgtt 445

                                                                       
Query: 421 gggaagataaaggaaggtgtagaggctatttcacttatcaaaggaatggaggtcaagatg 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 gggaagataaaggaaggtgtagaggctatttcacttatcaaaggaatggaggtcaagatg 505

                                                                       
Query: 481 gaaggcccttgcatgatctccagtcttatttcgtcgcaacttagggttaactgttgtgtg 540
           |||||||||||||||||||||||||||||||| |||||||||  ||||||||||||||||
Sbjct: 506 gaaggcccttgcatgatctccagtcttatttcctcgcaactttaggttaactgttgtgtg 565

                 
Query: 541 ctaatg 546
           ||||||
Sbjct: 566 ctaatg 571