Jatropha Genome Database

JcCB0041981.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0041981.10 + phase: 0 /partial
         (969 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|268521491|gb|FM894243.1|FM894243 FM894243 Jatropha curcas emb...   287   1e-77

>gi|268521491|gb|FM894243.1|FM894243 FM894243 Jatropha curcas embryo
           71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_004548,
           mRNA sequence
          Length = 546

 Score =  287 bits (145), Expect = 1e-77
 Identities = 152/153 (99%), Gaps = 1/153 (0%)
 Strand = Plus / Plus

                                                                       
Query: 817 gcccttactacatctcttgctgatatgcgggaaaggcttgggaatatggttgttggaaat 876
           |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 1   gcccttactacatctcttgctgatatgcgggaaaggct-gggaatatggttgttggaaat 59

                                                                       
Query: 877 agcaaggctggtgaccctataacagctgatgatcttggtgttggaggtgctttgactgta 936
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 60  agcaaggctggtgaccctataacagctgatgatcttggtgttggaggtgctttgactgta 119

                                            
Query: 937 ctaatgaaagatgccatcaatcctactctaatg 969
           |||||||||||||||||||||||||||||||||
Sbjct: 120 ctaatgaaagatgccatcaatcctactctaatg 152