Jatropha Genome Database

JcCB0041791.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0041791.10 + phase: 0 /pseudo/partial
         (888 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|237679846|gb|GO247151.1|GO247151 JcrME_RL0695 Expressed seque...   682   0.0  

>gi|237679846|gb|GO247151.1|GO247151 JcrME_RL0695 Expressed sequence
           tags from Jatropha curcas root cDNA library Jatropha
           curcas cDNA, mRNA sequence
          Length = 633

 Score =  682 bits (344), Expect = 0.0
 Identities = 344/344 (100%)
 Strand = Plus / Plus

                                                                       
Query: 545 atatggacactacaatgatcccaggagagagtagaggaaaggagattgaaatgcaaggac 604
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2   atatggacactacaatgatcccaggagagagtagaggaaaggagattgaaatgcaaggac 61

                                                                       
Query: 605 aagattctaatagaatgtgctcagatctcaccacctctcaggactttgtgagtgggctta 664
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62  aagattctaatagaatgtgctcagatctcaccacctctcaggactttgtgagtgggctta 121

                                                                       
Query: 665 tgaagattgttccttcagaagtagatagtgatgcagattactggcttctttcagatgctg 724
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 tgaagattgttccttcagaagtagatagtgatgcagattactggcttctttcagatgctg 181

                                                                       
Query: 725 atgttagcatcacagacatgtggcgaactgaacctggagttgagtggaatgagtttggta 784
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 atgttagcatcacagacatgtggcgaactgaacctggagttgagtggaatgagtttggta 241

                                                                       
Query: 785 cacttcaagatgactatggcatggcaaatgtcagcacacctcagccccaaactccaccac 844
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 cacttcaagatgactatggcatggcaaatgtcagcacacctcagccccaaactccaccac 301

                                                       
Query: 845 tgaatccagcggaagtgcctccaaatgctaatactactgcaggc 888
           ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 tgaatccagcggaagtgcctccaaatgctaatactactgcaggc 345