Jatropha Genome Database

JcCB0041771.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0041771.10 + phase: 0 
         (507 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|268524339|gb|FM895019.1|FM895019 FM895019 Jatropha curcas emb...   387   e-108

>gi|268524339|gb|FM895019.1|FM895019 FM895019 Jatropha curcas embryo
           71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_001352,
           mRNA sequence
          Length = 440

 Score =  387 bits (195), Expect = e-108
 Identities = 195/195 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggaagaggagagtcaggacagcaaactcaatagaatgagttgcagcagtggcatgccc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 atggaagaggagagtcaggacagcaaactcaatagaatgagttgcagcagtggcatgccc 305

                                                                       
Query: 61  gatgtcgttttagaatgtgtgatgccgtacatagatgacccacgagaccgcgacgctgtt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 gatgtcgttttagaatgtgtgatgccgtacatagatgacccacgagaccgcgacgctgtt 365

                                                                       
Query: 121 tcactggtttgtcgtcgctggtatgagcttgacgccttaacgcgaaagcatataacgatc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 tcactggtttgtcgtcgctggtatgagcttgacgccttaacgcgaaagcatataacgatc 425

                          
Query: 181 gctttatgctatacc 195
           |||||||||||||||
Sbjct: 426 gctttatgctatacc 440