Jatropha Genome Database
- JcCB0036391.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0036391.10 + phase: 0 /pseudo
(1383 letters)
Database: JAT_13201ests
13,201 sequences; 6,040,684 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|268517509|gb|FM889220.1|FM889220 FM889220 Jatropha curcas emb... 569 e-162
gi|268516688|gb|FM890395.1|FM890395 FM890395 Jatropha curcas emb... 305 7e-83
gi|268520629|gb|FM889387.1|FM889387 FM889387 Jatropha curcas emb... 151 3e-36
>gi|268517509|gb|FM889220.1|FM889220 FM889220 Jatropha curcas embryo
35-55 (DAF) Jatropha curcas cDNA clone rjcfea0_002820,
mRNA sequence
Length = 387
Score = 569 bits (287), Expect = e-162
Identities = 345/356 (96%), Gaps = 8/356 (2%)
Strand = Plus / Plus
Query: 145 gggttgatcgaaccggacggtggcaagcttgtcgaactcttcgtcgacaagtctcagaag 204
||||||||||| ||||||||||||| |||||| ||||||||||||||| ||||||||||
Sbjct: 40 gggttgatcga-ccggacggtggca--cttgtc-aactcttcgtcgaca-gtctcagaag 94
Query: 205 gatgttagaaggaaagaggcgatttcattgcctaagattacgttgacgaagattgataga 264
|||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 95 gatgttnaaaggaaagaggcgatttc-ttgcctaagattacgttgacgaagattgataga 153
Query: 265 caatgggttcatgtattgagcgnaggttgggcaagtccactttctggattcatgagagaa 324
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 154 caatgggttcatgtattgagcgaaggttgggcaagtccactttctggattcatgagagaa 213
Query: 325 tcccgagttcctccaaaactcttcattttaatgccatccgtctcgaagacgggtcggttg 384
||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 214 tcc-gagttcctccaaa-ctcttcattttaatgccatccgtctcgaagacgggtcggttg 271
Query: 385 ttaacatgtcggtgccgattgtgctcgccatcgacgatttgcagaagcaacggatcggcg 444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 ttaacatgtcggtgccgattgtgctcgccatcgacgatttgcagaagcaacggatcggcg 331
Query: 445 agtccaaaagggtcgctctcgtcgattctgacgataagacgattgcaattttgaac 500
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 agtccaaaagggtcgctctcgtcgattctgacgataagacgattgcaattttgaac 387
>gi|268516688|gb|FM890395.1|FM890395 FM890395 Jatropha curcas embryo
35-55 (DAF) Jatropha curcas cDNA clone rjcfea0_004245,
mRNA sequence
Length = 455
Score = 305 bits (154), Expect = 7e-83
Identities = 154/154 (100%)
Strand = Plus / Plus
Query: 1230 cttcatatcaggcaccaagatgcgaacacttgcgaagaacaaggagaacccacctgatgg 1289
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cttcatatcaggcaccaagatgcgaacacttgcgaagaacaaggagaacccacctgatgg 60
Query: 1290 attcatgtgccctggtggctggaatgtgttggttgaatactatgacagtttagctccagc 1349
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 attcatgtgccctggtggctggaatgtgttggttgaatactatgacagtttagctccagc 120
Query: 1350 tgacaatggcaaagtgcctgaaccagtttcagtg 1383
||||||||||||||||||||||||||||||||||
Sbjct: 121 tgacaatggcaaagtgcctgaaccagtttcagtg 154
>gi|268520629|gb|FM889387.1|FM889387 FM889387 Jatropha curcas embryo
35-55 (DAF) Jatropha curcas cDNA clone rjcfea0_003045,
mRNA sequence
Length = 352
Score = 151 bits (76), Expect = 3e-36
Identities = 76/76 (100%)
Strand = Plus / Plus
Query: 1308 ctggaatgtgttggttgaatactatgacagtttagctccagctgacaatggcaaagtgcc 1367
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ctggaatgtgttggttgaatactatgacagtttagctccagctgacaatggcaaagtgcc 60
Query: 1368 tgaaccagtttcagtg 1383
||||||||||||||||
Sbjct: 61 tgaaccagtttcagtg 76