Jatropha Genome Database

JcCB0027861.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0027861.10 - phase: 0 /pseudo/partial
         (1197 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|268520185|gb|FM890033.1|FM890033 FM890033 Jatropha curcas emb...   775   0.0  

>gi|268520185|gb|FM890033.1|FM890033 FM890033 Jatropha curcas embryo
           35-55 (DAF) Jatropha curcas cDNA clone rjcfea0_003818,
           mRNA sequence
          Length = 578

 Score =  775 bits (391), Expect = 0.0
 Identities = 391/391 (100%)
 Strand = Plus / Plus

                                                                       
Query: 74  gatttggaggtgcattggatttagccgctgtgcttgacttcgttgactcaggccatgact 133
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 gatttggaggtgcattggatttagccgctgtgcttgacttcgttgactcaggccatgact 247

                                                                       
Query: 134 tgattatagccgctgatgcttctgcttctgatttcattaagagcatcgcaaccgaatgtg 193
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 tgattatagccgctgatgcttctgcttctgatttcattaagagcatcgcaaccgaatgtg 307

                                                                       
Query: 194 gggtcgattttgatgaggatccttccgcaatggtcattgatcataaaagctatgcagtct 253
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 gggtcgattttgatgaggatccttccgcaatggtcattgatcataaaagctatgcagtct 367

                                                                       
Query: 254 cgaagactgagggtgatcatacgttgattgctgcagacagtttcattgaatctgatgtta 313
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 cgaagactgagggtgatcatacgttgattgctgcagacagtttcattgaatctgatgtta 427

                                                                       
Query: 314 tactgggaaaaactaaaattgaggccccagtactttttaaaggtattgcacattctataa 373
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 tactgggaaaaactaaaattgaggccccagtactttttaaaggtattgcacattctataa 487

                                                                       
Query: 374 atgcagccaatggcttggccttgaaagtcctttcagcttctccttcggcatattcagcaa 433
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 atgcagccaatggcttggccttgaaagtcctttcagcttctccttcggcatattcagcaa 547

                                          
Query: 434 atcctagttccaagctatcaagtcccccatc 464
           |||||||||||||||||||||||||||||||
Sbjct: 548 atcctagttccaagctatcaagtcccccatc 578