Jatropha Genome Database

JcCB0026071.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0026071.10 - phase: 0 
         (516 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|268519747|gb|FM888214.1|FM888214 FM888214 Jatropha curcas emb...   630   0.0  

>gi|268519747|gb|FM888214.1|FM888214 FM888214 Jatropha curcas embryo
           35-55 (DAF) Jatropha curcas cDNA clone rjcfea0_001568,
           mRNA sequence
          Length = 419

 Score =  630 bits (318), Expect = 0.0
 Identities = 325/326 (99%), Gaps = 1/326 (0%)
 Strand = Plus / Plus

                                                                       
Query: 191 cactttcttaccttcctccactctccgatgactcgattgccaagaatatcgattacatga 250
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   cactttcttaccttcctccactctccgatgactcgattgccaagaatatcgattacatga 60

                                                                       
Query: 251 taaaaatgggatggatcccttgccttgaatttgatgaggttgggcacgtgcgtagagaga 310
           |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  taaaaatgggatggatcc-ttgccttgaatttgatgaggttgggcacgtgcgtagagaga 119

                                                                       
Query: 311 atagcagaatgccaggatactatgatgggagatattggacattgtggaagctcccaatgt 370
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120 atagcagaatgccaggatactatgatgggagatattggacattgtggaagctcccaatgt 179

                                                                       
Query: 371 ttggttgcaatgactctgctcaggttctaaatgaaatgcatgaatgcaaaaaagcatacc 430
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 180 ttggttgcaatgactctgctcaggttctaaatgaaatgcatgaatgcaaaaaagcatacc 239

                                                                       
Query: 431 caaatgcttatatacgctgcttggcatttgacaacaagaagcagtgtcagtgcatgtcct 490
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 caaatgcttatatacgctgcttggcatttgacaacaagaagcagtgtcagtgcatgtcct 299

                                     
Query: 491 tcatcattcaaaaacctcaactctaa 516
           ||||||||||||||||||||||||||
Sbjct: 300 tcatcattcaaaaacctcaactctaa 325