Jatropha Genome Database

JcCB0021881.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0021881.10 + phase: 0 
         (1707 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|262090893|gb|GT229251.1|GT229251 JC816 Jatropha seeds from fr...   470   e-132

>gi|262090893|gb|GT229251.1|GT229251 JC816 Jatropha seeds from
           fruits at three stages of maturation Jatropha curcas
           cDNA clone PL20SE.E11.scf 5', mRNA sequence
          Length = 513

 Score =  470 bits (237), Expect = e-132
 Identities = 237/237 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggagcaccagctttttggatacggtgtaactggtgcgggcttatcctattcatcttct 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 atggagcaccagctttttggatacggtgtaactggtgcgggcttatcctattcatcttct 332

                                                                       
Query: 61  tatccaattattccttcaatacctaataggctttttgagtccttcacatttgatatagga 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 tatccaattattccttcaatacctaataggctttttgagtccttcacatttgatatagga 392

                                                                       
Query: 121 aactcacctagctcacacttctcaaatcagtttgattgcgataccattaccacgttgagt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 aactcacctagctcacacttctcaaatcagtttgattgcgataccattaccacgttgagt 452

                                                                    
Query: 181 gacagccaggagcggtatagttcgactgagaatccttcaggagcaagcccttcttgt 237
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 gacagccaggagcggtatagttcgactgagaatccttcaggagcaagcccttcttgt 509